Basic Information:

  VIRBase ID:  

VHID00623542

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m108-1-3p:  MIMAT0005558          Pxylp1:  NM_153420     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m108-1-3p	Pxylp1
miRBase Accession/Entrez ID	MIMAT0005558	235534
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	9430094M07Rik//Ac//Acpl2//BB177120//C130099A20Rik

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	Pxylp1	chr9:96734699(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Pxylp1	chr9:96824406-96824407(-) m6A 3'UTR       24981863//25569111//22608085 chr9:96824414-96824415(-) m6A 3'UTR       24981863//25569111//22608085 chr9:96824570-96824571(-) m6A 3'UTR       25456834//24981863//25569111//22608085 chr9:96824775-96824776(-) m6A CDS       25456834//24981863//25569111//22608085 chr9:96824879-96824880(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr9:96824898-96824899(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr9:96825279-96825280(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr9:96825307-96825308(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr9:96825324-96825325(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr9:96825356-96825357(-) m6A CDS       25456834//25412662//24981863//25569111//22608085 chr9:96825375-96825376(-) m6A CDS       25456834//25412662//24981863//25569111 chr9:96825534-96825535(-) m6A CDS       24981863//25569111 chr9:96825560-96825561(-) m6A CDS       24981863//25569111 chr9:96825566-96825567(-) m6A CDS       24981863//25569111 chr9:96825582-96825583(-) m6A CDS       24981863//25569111 chr9:96828932-96828933(-) m6A CDS       24981863//25569111 chr9:96889367-96889368(-) m6A 5'UTR//exon//intron       25569111

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m108-1-3p
Interactor2: Pxylp1

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar