Basic Information:

  VIRBase ID:  

VHID00623539

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m108-1-3p:  MIMAT0005558          Prtg:  NM_175485     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m108-1-3p	Prtg
miRBase Accession/Entrez ID	MIMAT0005558	235472
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	A230098A12Rik//Igdcc//Igdcc5

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Prtg	chr9:72807422-72807423(+) m6A 5'UTR       25412662 chr9:72856931-72856932(+) m6A CDS       25683224 chr9:72856941-72856942(+) m6A CDS       25683224 chr9:72856978-72856979(+) m6A CDS       25683224 chr9:72857043-72857044(+) m6A CDS       25683224 chr9:72858776-72858777(+) m6A CDS       25683224 chr9:72858788-72858789(+) m6A CDS       25683224 chr9:72910715-72910716(+) m6A CDS//exon       25569111 chr9:72910737-72910738(+) m6A CDS//exon       25569111 chr9:72911996-72911997(+) m6A CDS//exon       25456834//25412662//25569111 chr9:72912013-72912014(+) m6A CDS//exon       25456834//25412662//25569111 chr9:72912054-72912055(+) m6A CDS//exon       25456834//25412662//25569111 chr9:72912074-72912075(+) m6A CDS//exon       25456834//25412662//25569111 chr9:72912213-72912214(+) m6A CDS//exon       25456834//25569111 chr9:72912242-72912243(+) m6A CDS//exon       25456834//25569111 chr9:72912257-72912258(+) m6A CDS//exon       25456834//25569111 chr9:72912302-72912303(+) m6A 3'UTR//exon       25456834//25569111 chr9:72912344-72912345(+) m6A 3'UTR       25456834//25569111 chr9:72912438-72912439(+) m6A 3'UTR       25683224//25456834//24981863//25569111 chr9:72912515-72912516(+) m6A 3'UTR       25683224//25456834//24981863//25569111 chr9:72912547-72912548(+) m6A 3'UTR       25683224//25456834//24981863//25569111 chr9:72912595-72912596(+) m6A 3'UTR       25683224//25456834//24981863//25569111 chr9:72912604-72912605(+) m6A 3'UTR       25683224//25456834//24981863//25569111 chr9:72912659-72912660(+) m6A 3'UTR       25683224//25456834//25569111 chr9:72912779-72912780(+) m6A 3'UTR       25683224 chr9:72913561-72913562(+) m6A 3'UTR       25683224 chr9:72913567-72913568(+) m6A 3'UTR       25683224 chr9:72913588-72913589(+) m6A 3'UTR       25683224 chr9:72913823-72913824(+) m6A 3'UTR       25683224 chr9:72915683-72915684(+) m6A 3'UTR       25456834//25569111 chr9:72915754-72915755(+) m6A 3'UTR       25456834//25569111 chr9:72915783-72915784(+) m6A 3'UTR       25456834//25569111 chr9:72915817-72915818(+) m6A 3'UTR       25456834//25569111 chr9:72915827-72915828(+) m6A 3'UTR       25456834//25569111 chr9:72915890-72915891(+) m6A 3'UTR       25456834//25569111

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m108-1-3p
Interactor2: Prtg

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar