Basic Information:

  VIRBase ID:  

VHID00623519

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m108-1-3p:  MIMAT0005558          Ddx19b:  NM_172284     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m108-1-3p	Ddx19b
miRBase Accession/Entrez ID	MIMAT0005558	234733
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	2810457M08Rik//4921519L13Rik//AW260119

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	Ddx19b	chr8:113528452(-) A-I      3'UTR chr8:113529026(-) A-I      3'UTR chr8:113528447(-) A-I      3'UTR

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	Ddx19b	chr8:111004547(-) A-I exon 3'UTR    22524474 chr8:111004552(-) A-I exon 3'UTR    22524474 chr8:111005126(-) A-I exon 3'UTR    22524474

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Ddx19b	chr8:111004053-111004054(-) Y 3'UTR//exon       26075521 chr8:111005177-111005178(-) m6A 3'UTR       22608085 chr8:111005184-111005185(-) m6A 3'UTR       22608085 chr8:111005189-111005190(-) m6A 3'UTR       22608085 chr8:111005202-111005203(-) m6A 3'UTR       - chr8:111005233-111005234(-) m6A 3'UTR       - chr8:111007588-111007589(-) m6A 3'UTR       25569111 chr8:111007638-111007639(-) m6A 3'UTR       24981863//25569111//22608085 chr8:111007683-111007684(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr8:111007765-111007766(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr8:111007778-111007779(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr8:111007875-111007876(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr8:111007934-111007935(-) m6A 3'UTR       25456834//24981863//25569111//22608085 chr8:111007990-111007991(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr8:111008106-111008107(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr8:111008136-111008137(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr8:111008154-111008155(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr8:111008289-111008290(-) m6A CDS       24981863 chr8:111008294-111008295(-) m6A CDS       24981863 chr8:111008696-111008697(-) m6A CDS       25683224 chr8:111008763-111008764(-) m6A CDS       25683224 chr8:111008771-111008772(-) m6A CDS       25683224 chr8:111008777-111008778(-) m6A CDS       25683224 chr8:111008789-111008790(-) m6A CDS       25683224 chr8:111010819-111010820(-) m6A CDS       25683224 chr8:111010829-111010830(-) m6A CDS       25683224 chr8:111010836-111010837(-) m6A CDS       25683224 chr8:111010871-111010872(-) m6A CDS       25683224 chr8:111010907-111010908(-) m6A CDS       25683224 chr8:111010943-111010944(-) m6A CDS       25683224 chr8:111021091-111021092(-) m6A CDS       25412662 chr8:111022418-111022419(-) m6A CDS       25412662//24981863 chr8:111022429-111022430(-) m6A CDS       25412662//24981863 chr8:111022439-111022440(-) m6A CDS       25412662//24981863 chr8:111023978-111023979(-) m6A CDS       25412662//24981863//25569111 chr8:111027618-111027619(-) m6A CDS//intron       25412662//24981863//25569111 chr8:111027734-111027735(-) m6A 5'UTR//intron       24981863//25569111

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m108-1-3p
Interactor2: Ddx19b

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar