Basic Information:

  VIRBase ID:  

VHID00623117

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m108-1-3p:  MIMAT0005558          Slu7:  NM_198936     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m108-1-3p	Slu7
miRBase Accession/Entrez ID	MIMAT0005558	193116
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	AU018913//D11Ertd730//D11Ertd730e//D3Bwg0878e

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Slu7	chr11:43433748-43433749(+) m6A 5'UTR       24981863//25569111 chr11:43433760-43433761(+) m6A 5'UTR       24981863//25569111 chr11:43435076-43435077(+) m6A 5'UTR//intron       24981863//25569111 chr11:43435098-43435099(+) m6A 5'UTR//intron       24981863//25569111 chr11:43436368-43436369(+) m6A 5'UTR//intron       24981863 chr11:43437379-43437380(+) m6A CDS//exon       25412662//24981863//25569111 chr11:43437454-43437455(+) m6A CDS//exon       25412662//24981863//25569111 chr11:43437482-43437483(+) m6A CDS//exon       25412662//24981863 chr11:43437491-43437492(+) m6A CDS//exon       25412662//24981863 chr11:43438188-43438189(+) m6A CDS//exon       24981863//22608085 chr11:43438209-43438210(+) m6A CDS//exon       24981863//22608085 chr11:43438224-43438225(+) m6A CDS//exon       24981863//22608085 chr11:43439052-43439053(+) m6A exon//intron       24981863 chr11:43439154-43439155(+) m6A CDS//exon       24981863 chr11:43439185-43439186(+) m6A CDS//exon       25683224//24981863 chr11:43439249-43439250(+) m6A CDS       25683224//24981863 chr11:43440619-43440620(+) m6A CDS       25683224//24981863 chr11:43440636-43440637(+) m6A CDS       25683224//25412662//24981863 chr11:43441231-43441232(+) m6A CDS       25683224//25412662//24981863 chr11:43441252-43441253(+) m6A CDS       25683224//25412662//24981863 chr11:43441479-43441480(+) m6A CDS//exon       25412662//24981863 chr11:43442600-43442601(+) m6A CDS//exon       22608085 chr11:43442641-43442642(+) m6A CDS       22608085 chr11:43443287-43443288(+) m6A CDS       22608085 chr11:43443327-43443328(+) m6A CDS       22608085 chr11:43443334-43443335(+) m6A CDS       22608085 chr11:43445236-43445237(+) m6A CDS       25683224//25412662//24981863 chr11:43445372-43445373(+) m6A CDS       25683224//25412662//24981863 chr11:43445411-43445412(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr11:43445462-43445463(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr11:43446101-43446102(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr11:43446184-43446185(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr11:43446205-43446206(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr11:43446331-43446332(+) m6A 3'UTR       24981863 chr11:43447110-43447111(+) m6A 3'UTR       24981863 chr11:43447116-43447117(+) m6A 3'UTR       24981863 chr11:43447124-43447125(+) m6A 3'UTR       24981863 chr11:43447234-43447235(+) m6A 3'UTR       24981863//22608085 chr11:43447250-43447251(+) m6A 3'UTR       24981863//22608085 chr11:43447303-43447304(+) m6A 3'UTR       24981863//22608085 chr11:43447321-43447322(+) m6A 3'UTR       24981863//22608085 chr11:43447385-43447386(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr11:43447396-43447397(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr11:43447437-43447438(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr11:43447463-43447464(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr11:43447476-43447477(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr11:43447501-43447502(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr11:43447554-43447555(+) m6A 3'UTR       25683224//25412662//24981863//25569111//22608085 chr11:43447566-43447567(+) m6A 3'UTR       24981863//22608085 chr11:43447749-43447750(+) m6A 3'UTR       24981863 chr11:43447757-43447758(+) m6A 3'UTR       24981863 chr11:43447771-43447772(+) m6A 3'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Slu7	Nucleus Neuroblastoma cell line (N2A)     22406755 Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m108-1-3p
Interactor2: Slu7

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar