Detail Information

Basic Information:


  VIRBase ID:  

VHID00623104

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m108-1-3p:           Syt12:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol mcmv-miR-m108-1-3p Syt12
miRBase
Accession/Entrez ID		 MIMAT0005558 171180
Organism Murid betaherpesvirus 1 Mus musculus
Category miRNA mRNA
Alias - -

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Syt12
chr19:4446042-4446043(-) m6A 3'UTR       25683224
chr19:4446074-4446075(-) m6A 3'UTR       25683224
chr19:4446174-4446175(-) m6A 3'UTR       25683224
chr19:4446844-4446845(-) m6A 3'UTR       25683224
chr19:4446915-4446916(-) m6A 3'UTR       25683224
chr19:4446977-4446978(-) m6A 3'UTR       24981863
chr19:4446997-4446998(-) m6A 3'UTR       24981863
chr19:4447016-4447017(-) m6A 3'UTR       24981863
chr19:4447022-4447023(-) m6A 3'UTR       24981863//22608085
chr19:4447037-4447038(-) m6A 3'UTR       24981863//22608085
chr19:4447043-4447044(-) m6A 3'UTR       24981863//22608085
chr19:4447144-4447145(-) m6A 3'UTR       24981863//22608085
chr19:4447192-4447193(-) m6A 3'UTR       24981863//22608085
chr19:4447244-4447245(-) m6A 3'UTR       24981863//22608085
chr19:4447267-4447268(-) m6A 3'UTR       24981863//22608085
chr19:4447327-4447328(-) m6A 3'UTR       24981863//22608085
chr19:4447362-4447363(-) m6A 3'UTR       24981863//22608085
chr19:4447431-4447432(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085
chr19:4447440-4447441(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085
chr19:4447486-4447487(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085
chr19:4447524-4447525(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085
chr19:4447586-4447587(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085
chr19:4447690-4447691(-) m6A CDS       25683224//25456834//25412662//25569111//22608085
chr19:4447747-4447748(-) m6A CDS//exon       25683224//25456834//25412662//25569111
chr19:4447807-4447808(-) m6A CDS//exon       25683224//25456834//25412662//25569111//22608085
chr19:4456515-4456516(-) m6A CDS       25683224//24981863
chr19:4456582-4456583(-) m6A CDS       25683224//24981863//22608085
chr19:4456633-4456634(-) m6A CDS       25683224//24981863//25569111//22608085
chr19:4456753-4456754(-) m6A CDS       25683224//25456834//24981863//25569111//22608085
chr19:4456758-4456759(-) m6A CDS       25683224//25456834//24981863//25569111//22608085
chr19:4456782-4456783(-) m6A CDS       25683224//24981863//25569111//22608085
chr19:4456810-4456811(-) m6A CDS       25683224//24981863//25569111//22608085
chr19:4456845-4456846(-) m6A CDS       25683224//24981863//25569111
chr19:4456859-4456860(-) m6A CDS       25683224//24981863//25569111
chr19:4460714-4460715(-) m6A CDS       25569111
chr19:4476940-4476941(-) m6A 5'UTR//exon       25569111
chr19:4476960-4476961(-) m6A 5'UTR//exon       25569111
chr19:4476972-4476973(-) m6A 5'UTR//exon       24981863//25569111

Interaction Network (The top 100 interactions):


Interactor1: mcmv-miR-m108-1-3p
Interactor2: Syt12

Evidence Support:


Prediction-Evidence cRep//Rep
Support Database RepTar

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