Basic Information:

  VIRBase ID:  

VHID00623065

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m108-1-3p:  MIMAT0005558          Pip4k2c:  NM_001359280     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m108-1-3p	Pip4k2c
miRBase Accession/Entrez ID	MIMAT0005558	117150
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	Pip5//Pip5k2c

RNA Editing:

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	Pip4k2c	chr10:127202428(-) A-I intron -    22524474 chr10:127202437(-) A-I intron -    22524474 chr10:127205135(-) A-I intron -    22524474

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Pip4k2c	chr10:127198214-127198215(-) m6A 3'UTR       25683224//25569111//22608085 chr10:127198279-127198280(-) m6A 3'UTR       25683224//24981863//25569111 chr10:127198447-127198448(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr10:127198463-127198464(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr10:127198523-127198524(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr10:127198647-127198648(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr10:127198694-127198695(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr10:127198701-127198702(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr10:127198711-127198712(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr10:127198889-127198890(-) m6A 3'UTR       24981863//25569111 chr10:127198988-127198989(-) m6A 3'UTR       24981863//25569111//22608085 chr10:127199088-127199089(-) m6A CDS       24981863//25569111//22608085 chr10:127199326-127199327(-) m6A CDS       24981863 chr10:127199718-127199719(-) m6A CDS       25683224//25412662//24981863//25569111 chr10:127199734-127199735(-) m6A CDS       25683224//25412662//24981863//25569111 chr10:127199784-127199785(-) m6A CDS       25683224//25412662//24981863//25569111 chr10:127199830-127199831(-) m6A CDS       25683224//25412662//25569111 chr10:127200250-127200251(-) m6A CDS       25683224 chr10:127200265-127200266(-) m6A CDS       25683224 chr10:127211429-127211430(-) m6A CDS       25412662//24981863//25569111 chr10:127211513-127211514(-) m6A 5'UTR       25412662//24981863//25569111

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m108-1-3p
Interactor2: Pip4k2c

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar