Basic Information:

  VIRBase ID:  

VHID00623026

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m108-1-3p:  MIMAT0005558          Braf:  NM_139294     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m108-1-3p	Braf
miRBase Accession/Entrez ID	MIMAT0005558	109880
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	9930012E13Rik//AA120551//AA387315//AA473386//B-raf//Bra//Braf-2//Braf2//C230098H17//C87398//D6Ertd631//D6Ertd631e

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Braf	chr6:39603608-39603609(-) m6A 3'UTR       26404942 chr6:39603701-39603702(-) Y 3'UTR//exon       26075521 chr6:39603923-39603924(-) m6A 3'UTR       24981863//25569111//22608085 chr6:39603984-39603985(-) m6A 3'UTR       24981863//25569111//22608085 chr6:39603999-39604000(-) m6A 3'UTR       24981863//25569111//22608085 chr6:39604017-39604018(-) m6A 3'UTR       24981863//25569111//22608085 chr6:39604057-39604058(-) m6A 3'UTR       24981863//25569111//22608085 chr6:39604077-39604078(-) m6A 3'UTR       24981863//25569111//22608085 chr6:39604513-39604514(-) m6A 3'UTR       24981863//25569111//22608085 chr6:39604530-39604531(-) m6A 3'UTR       24981863//25569111//22608085 chr6:39604549-39604550(-) m6A 3'UTR       24981863//25569111//22608085 chr6:39604576-39604577(-) m6A 3'UTR       24981863//25569111//22608085 chr6:39604601-39604602(-) m6A 3'UTR       24981863//25569111//22608085 chr6:39604614-39604615(-) m6A 3'UTR       24981863//25569111//22608085 chr6:39604628-39604629(-) m6A 3'UTR       24981863//25569111//22608085 chr6:39604635-39604636(-) m6A 3'UTR       24981863//25569111//22608085 chr6:39604673-39604674(-) m6A 3'UTR       24981863 chr6:39604681-39604682(-) m6A 3'UTR       24981863 chr6:39605539-39605540(-) m6A 3'UTR       24981863//22608085 chr6:39605570-39605571(-) m6A 3'UTR       24981863//22608085 chr6:39605587-39605588(-) m6A 3'UTR       24981863//22608085 chr6:39607041-39607042(-) m6A 3'UTR       24981863//22608085 chr6:39607113-39607114(-) m6A 3'UTR       24981863//22608085 chr6:39607135-39607136(-) m6A 3'UTR       24981863//22608085 chr6:39607147-39607148(-) m6A 3'UTR       24981863//22608085 chr6:39608943-39608944(-) m6A 3'UTR       24981863 chr6:39610108-39610109(-) m6A 3'UTR       24981863//25569111//22608085 chr6:39610196-39610197(-) m6A 3'UTR       24981863//25569111//22608085 chr6:39610244-39610245(-) m6A 3'UTR       24981863//25569111//22608085 chr6:39610310-39610311(-) m6A 3'UTR       24981863 chr6:39651629-39651630(-) m6A CDS//exon       25412662//24981863 chr6:39651662-39651663(-) m6A CDS//exon       25412662//24981863 chr6:39653464-39653465(-) m6A intron       25569111 chr6:39653550-39653551(-) m6A intron       25683224//24981863//25569111//22608085 chr6:39653625-39653626(-) m6A intron       25683224//25456834//24981863//25569111//22608085 chr6:39653636-39653637(-) m6A intron       25683224//25456834//24981863//25569111//22608085 chr6:39653645-39653646(-) m6A intron       25683224//25456834//24981863//25569111//22608085 chr6:39653727-39653728(-) m6A intron       25683224//25456834//24981863//25569111//22608085 chr6:39653732-39653733(-) m6A intron       25683224//25456834//24981863//25569111//22608085 chr6:39653772-39653773(-) m6A intron       25683224//25456834//25569111//22608085 chr6:39653817-39653818(-) m6A intron       25683224//25569111 chr6:39660881-39660882(-) m6A CDS//exon       24981863 chr6:39660898-39660899(-) Y CDS//exon       26075521 chr6:39662142-39662143(-) m6A CDS//exon       22608085 chr6:39677463-39677464(-) m6A CDS       24981863//22608085 chr6:39677528-39677529(-) m6A CDS//intron       24981863//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Braf	Exosome Mast cells     17486113

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m108-1-3p
Interactor2: Braf

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar