Basic Information:

  VIRBase ID:  

VHID00622991

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m108-1-3p:  MIMAT0005558          Galnt7:  NM_001167981     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m108-1-3p	Galnt7
miRBase Accession/Entrez ID	MIMAT0005558	108150
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	AI225872

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Galnt7	chr8:57525823-57525824(-) m6A 3'UTR       25456834//24981863//22608085 chr8:57525900-57525901(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr8:57525916-57525917(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr8:57525963-57525964(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr8:57525996-57525997(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr8:57526003-57526004(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr8:57526043-57526044(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr8:57526053-57526054(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr8:57526060-57526061(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr8:57526098-57526099(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr8:57526107-57526108(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr8:57531707-57531708(-) m6A CDS//exon       25412662//22608085 chr8:57532631-57532632(-) m6A CDS//exon       25412662//22608085 chr8:57532654-57532655(-) m6A CDS//exon       25412662//22608085 chr8:57532710-57532711(-) m6A CDS//exon       25412662//22608085 chr8:57536709-57536710(-) m6A CDS//exon       25683224 chr8:57536757-57536758(-) m6A CDS//exon       25683224 chr8:57542524-57542525(-) m6A CDS//exon//intron       25683224//25456834//24981863 chr8:57542530-57542531(-) m6A CDS//exon//intron       25683224//25456834//24981863 chr8:57542540-57542541(-) m6A CDS//exon//intron       25683224//25456834//24981863 chr8:57542589-57542590(-) m6A CDS//exon//intron       25683224//25456834//24981863 chr8:57583796-57583797(-) m6A CDS//exon       24981863 chr8:57583864-57583865(-) m6A CDS//exon       24981863//25569111 chr8:57583876-57583877(-) m6A CDS//exon       25456834//24981863//25569111 chr8:57583936-57583937(-) m6A CDS//exon       25456834//24981863//25569111//22608085 chr8:57583945-57583946(-) m6A CDS//exon       25456834//24981863//25569111//22608085 chr8:57583952-57583953(-) m6A CDS//exon       25456834//24981863//25569111//22608085 chr8:57583998-57583999(-) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085 chr8:57584071-57584072(-) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085 chr8:57584087-57584088(-) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085 chr8:57584111-57584112(-) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085 chr8:57584152-57584153(-) m6A CDS//exon       25683224//25456834//24981863//25569111 chr8:57584179-57584180(-) m6A CDS//exon       25456834//24981863//25569111 chr8:57584222-57584223(-) m6A CDS//exon       24981863//25569111 chr8:57651703-57651704(-) m6A intron       24981863 chr8:57651751-57651752(-) m6A intron       24981863 chr8:57651810-57651811(-) m6A intron       25412662//24981863//25569111 chr8:57651966-57651967(-) m6A intron       25412662//24981863//25569111 chr8:57652099-57652100(-) m6A intron       25683224//25412662//24981863//25569111 chr8:57652110-57652111(-) m6A intron       25683224//25412662//24981863//25569111

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Galnt7	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m108-1-3p
Interactor2: Galnt7

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar