Basic Information:

  VIRBase ID:  

VHID00622624

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m108-1-3p:  MIMAT0005558          Cep57:  NR_037622     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m108-1-3p	Cep57
miRBase Accession/Entrez ID	MIMAT0005558	74360
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	3110002L15Rik//4921510P06Rik//4931428M20Rik//AI467480//mKIAA0092//Tsp//Tsp57

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Cep57	chr9:13808156-13808157(-) m6A 3'UTR       24981863 chr9:13808181-13808182(-) m6A 3'UTR       24981863//22608085 chr9:13808337-13808338(-) m6A 3'UTR       25569111 chr9:13808376-13808377(-) m6A 3'UTR       25569111 chr9:13808543-13808544(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr9:13808553-13808554(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr9:13808653-13808654(-) m6A 3'UTR//CDS       25683224//25456834//24981863//25569111//22608085 chr9:13808661-13808662(-) m6A 3'UTR//CDS       25683224//25456834//24981863//25569111//22608085 chr9:13808702-13808703(-) m6A 3'UTR//CDS       25683224//25456834//24981863//25569111//22608085 chr9:13808708-13808709(-) m6A 3'UTR//CDS       25683224//25456834//24981863//25569111//22608085 chr9:13808734-13808735(-) m6A 3'UTR//CDS       25683224//25456834//24981863//25569111//22608085 chr9:13808766-13808767(-) m6A 3'UTR//CDS//exon       25683224//25456834//24981863//25569111//22608085 chr9:13808785-13808786(-) m6A 3'UTR//CDS//exon       25683224//25456834//24981863//25569111//22608085 chr9:13808826-13808827(-) m6A 3'UTR//CDS//exon       25683224//25456834//24981863//25569111 chr9:13808831-13808832(-) m6A 3'UTR//CDS//exon       25683224//25456834//24981863//25569111 chr9:13809947-13809948(-) m6A 3'UTR//CDS//exon       25569111 chr9:13809955-13809956(-) m6A 3'UTR//CDS//exon       25569111 chr9:13813474-13813475(-) m6A 3'UTR//CDS//exon       24981863 chr9:13813493-13813494(-) m6A 3'UTR//CDS//exon       24981863 chr9:13816105-13816106(-) m6A 3'UTR//CDS//exon       25412662//24981863 chr9:13816913-13816914(-) m6A 3'UTR//CDS//exon       25412662//24981863 chr9:13816928-13816929(-) m6A 3'UTR//CDS//exon       25412662//24981863 chr9:13816943-13816944(-) m6A 3'UTR//CDS//exon       25412662//24981863 chr9:13816969-13816970(-) m6A 3'UTR//CDS//exon       24981863 chr9:13818342-13818343(-) m6A 3'UTR//CDS//exon       24981863 chr9:13818391-13818392(-) m6A 3'UTR//5'UTR//CDS//exon       24981863 chr9:13818442-13818443(-) m6A 3'UTR//5'UTR//CDS//exon       24981863 chr9:13818487-13818488(-) m6A 5'UTR//intron       24981863 chr9:13818492-13818493(-) m6A 5'UTR//intron       24981863 chr9:13818890-13818891(-) m6A 3'UTR//CDS//exon       25412662 chr9:13818910-13818911(-) m6A 3'UTR//CDS//exon       25412662 chr9:13818939-13818940(-) m6A 3'UTR//CDS//exon       25412662 chr9:13818954-13818955(-) m6A 3'UTR//CDS       25412662 chr9:13818988-13818989(-) m6A 3'UTR//CDS       25412662 chr9:13826986-13826987(-) m6A 5'UTR       25412662//24981863//25569111 chr9:13827034-13827035(-) m6A 5'UTR       25412662//24981863//25569111

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Cep57	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m108-1-3p
Interactor2: Cep57

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar