Basic Information:

  VIRBase ID:  

VHID00622607

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m108-1-3p:  MIMAT0005558          Crot:  NM_023733     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m108-1-3p	Crot
miRBase Accession/Entrez ID	MIMAT0005558	74114
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	1200003H03Rik

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Crot	chr5:8966524-8966525(-) m6A 3'UTR       26404942//22608085 chr5:8966663-8966664(-) m6A 3'UTR       26404942//22608085 chr5:8966823-8966824(-) m6A 3'UTR       25412662//24981863//26404942//22575960 chr5:8966842-8966843(-) m6A 3'UTR       25412662//24981863//26404942//22575960 chr5:8966848-8966849(-) m6A 3'UTR       25412662//24981863//26404942//22575960 chr5:8966867-8966868(-) m6A CDS       25412662//24981863//26404942//22575960 chr5:8988220-8988221(-) m6A CDS//exon       25412662//22608085 chr5:8989609-8989610(-) m6A CDS//exon       25412662//22608085 chr5:8989694-8989695(-) m6A CDS//exon       25412662//24981863//22608085 chr5:8989725-8989726(-) m6A CDS//exon       25412662//24981863//22608085 chr5:8993567-8993568(-) m6A CDS//exon       24981863//25569111//22608085 chr5:8993583-8993584(-) m6A CDS//exon       25569111

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Crot	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m108-1-3p
Interactor2: Crot

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar