Basic Information:

  VIRBase ID:  

VHID00622023

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m108-1-3p:  MIMAT0005558          Gosr2:  NM_001362852     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m108-1-3p	Gosr2
miRBase Accession/Entrez ID	MIMAT0005558	56494
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	2310032N09Rik//C76855//GS2//Gs27//memb//membrin//S//SNARE

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	Gosr2	chr11:103546219(-) A-I      intronic chr11:103546267(-) A-I      intronic chr11:103546236(-) A-I      intronic chr11:103546233(-) A-I      intronic chr11:103546167(-) A-I      intronic chr11:103546229(-) A-I      intronic chr11:103546280(-) A-I      intronic chr11:103546181(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	Gosr2	chr11:103684853(-) A-I intron -    22524474 chr11:103684867(-) A-I intron -    22524474 chr11:103684905(-) A-I intron -    22524474 chr11:103684915(-) A-I intron -    22524474 chr11:103684919(-) A-I intron -    22524474 chr11:103684922(-) A-I intron -    22524474 chr11:103684953(-) A-I intron -    22524474 chr11:103684966(-) A-I intron -    22524474

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Gosr2	chr11:103677254-103677255(-) m6A 3'UTR       24981863//25456834//22608085 chr11:103677344-103677345(-) m6A 3'UTR       25683224//24981863//25456834 chr11:103677445-103677446(-) m6A 3'UTR       25683224//24981863//25569111 chr11:103677603-103677604(-) m6A 3'UTR       25569111//22608085 chr11:103677644-103677645(-) m6A 3'UTR       25569111//22608085 chr11:103678691-103678692(-) m6A 3'UTR       24981863//25569111//22608085 chr11:103678763-103678764(-) m6A 3'UTR       24981863//25569111//22608085 chr11:103678907-103678908(-) m6A 3'UTR       25683224//24981863//25569111//22608085 chr11:103679014-103679015(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085//22575960 chr11:103679058-103679059(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085//22575960 chr11:103679093-103679094(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085//22575960 chr11:103679115-103679116(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085//22575960 chr11:103679132-103679133(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085//22575960 chr11:103679213-103679214(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085//22575960 chr11:103679308-103679309(-) m6A CDS//exon       25683224//24981863//25569111 chr11:103679384-103679385(-) m1A CDS//exon       26863196 chr11:103679393-103679394(-) m6A CDS//exon       24981863//25569111 chr11:103683803-103683804(-) m6A CDS//exon//intron       24981863//25569111//22608085 chr11:103683818-103683819(-) m6A CDS//exon//intron       25569111//22608085 chr11:103687526-103687527(-) m6A CDS//exon       24981863//22608085 chr11:103687538-103687539(-) m6A CDS//exon       24981863//22608085 chr11:103689271-103689272(-) m6A CDS//intron       24981863//25569111//22608085 chr11:103697632-103697633(-) m6A CDS//exon       25683224//24981863//25569111 chr11:103697725-103697726(-) m6A 5'UTR       25683224//24981863//25569111 chr11:103697770-103697771(-) m6A 5'UTR       25683224//25412662//24981863//25569111 chr11:103697877-103697878(-) m6A 5'UTR       25412662//24981863 chr11:103697890-103697891(-) m6A 5'UTR       25412662//24981863

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m108-1-3p
Interactor2: Gosr2

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar