Basic Information:

  VIRBase ID:  

VHID00621909

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m108-1-3p:  MIMAT0005558          Ccdc39:  NM_026222     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m108-1-3p	Ccdc39
miRBase Accession/Entrez ID	MIMAT0005558	51938
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	4921507O14Rik//AI447426//AI844750//b2b1304C//b2b1304Clo//b2b1735C//b2b1735Clo//b2b2025.1Clo//D3Ertd789//D3Ertd789e//p//prh

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Ccdc39	chr3:33821306-33821307(-) m6A exon//intron       24981863//22608085 chr3:33821324-33821325(-) m6A exon//intron       24981863//22608085 chr3:33821403-33821404(-) m6A CDS//exon       25456834//24981863//22608085 chr3:33821431-33821432(-) m6A CDS//exon//intron       25456834//24981863//22608085 chr3:33821436-33821437(-) m6A CDS//exon//intron       25456834//24981863//22608085 chr3:33821476-33821477(-) m6A CDS//exon//intron       25456834//24981863//22608085 chr3:33825449-33825450(-) m6A CDS//exon       22608085 chr3:33825459-33825460(-) m6A CDS//exon       22608085 chr3:33832570-33832571(-) m6A CDS//exon       25412662 chr3:33832633-33832634(-) m6A CDS//exon       25412662 chr3:33836728-33836729(-) m6A CDS//exon       25412662 chr3:33836767-33836768(-) m6A CDS//exon       25412662 chr3:33836963-33836964(-) m6A CDS//exon       25412662//22608085 chr3:33836970-33836971(-) m6A CDS//exon       25412662//22608085 chr3:33837834-33837835(-) Y CDS//exon       26075521 chr3:33839133-33839134(-) m6A CDS//exon       25683224//25412662 chr3:33839182-33839183(-) m6A CDS//exon       25683224//25412662

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m108-1-3p
Interactor2: Ccdc39

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar