Basic Information:

  VIRBase ID:  

VHID00621672

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m108-1-3p:  MIMAT0005558          Tfcp2:  NM_033476     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m108-1-3p	Tfcp2
miRBase Accession/Entrez ID	MIMAT0005558	21422
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	CP//CP-//CP-2//CP2//D230015P20Rik//L//LB//LBP-//LBP-1c//LBP-1d//LBP1//LSF//Tcfcp//Tcfcp2//UBP-//UBP-1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	Tfcp2	chr15:100356485(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	Tfcp2	chr15:100526054(-) A-I intron -    22524474

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Tfcp2	chr15:100503322-100503323(-) m6A 3'UTR       - chr15:100503372-100503373(-) m6A 3'UTR       24981863 chr15:100503419-100503420(-) m6A 3'UTR       24981863//25569111 chr15:100503427-100503428(-) m6A 3'UTR       25569111 chr15:100503484-100503485(-) m6A 3'UTR       24981863//25412662//25569111 chr15:100503492-100503493(-) m6A 3'UTR       24981863//25412662//25569111 chr15:100503608-100503609(-) m6A 3'UTR       24981863//25569111 chr15:100503618-100503619(-) m6A 3'UTR       24981863//25569111 chr15:100503625-100503626(-) m6A 3'UTR       24981863//25569111 chr15:100503676-100503677(-) m6A 3'UTR       25569111 chr15:100504316-100504317(-) m6A 3'UTR       25412662 chr15:100504345-100504346(-) m6A 3'UTR       25412662 chr15:100518586-100518587(-) m6A CDS       24981863 chr15:100518659-100518660(-) m6A CDS       24981863 chr15:100518666-100518667(-) m6A CDS       24981863 chr15:100522405-100522406(-) m6A CDS       25412662 chr15:100522419-100522420(-) m6A CDS       25412662 chr15:100522440-100522441(-) m6A CDS       25412662 chr15:100525583-100525584(-) m6A CDS       25412662 chr15:100525595-100525596(-) m6A CDS       25412662 chr15:100551915-100551916(-) m6A 5'UTR       25683224//25412662//24981863 chr15:100551981-100551982(-) m6A 5'UTR       25412662//25456834

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m108-1-3p
Interactor2: Tfcp2

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar