Basic Information:

  VIRBase ID:  

VHID00621577

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m108-1-3p:  MIMAT0005558          Scp2:  NM_011327     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m108-1-3p	Scp2
miRBase Accession/Entrez ID	MIMAT0005558	20280
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	AA409774//AA409893//C76618//C79031//ns//ns-LTP//NSL-TP//SC//SCP//SCP-2//SCP-X//SCPX

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Scp2	chr4:108044725-108044726(-) m6A 3'UTR//exon       25412662//22608085 chr4:108044783-108044784(-) m6A CDS//exon       25412662//24981863 chr4:108044791-108044792(-) m6A CDS//exon       25412662//24981863 chr4:108044803-108044804(-) m6A CDS//exon       25412662//24981863//22608085 chr4:108044827-108044828(-) m6A CDS//exon       25412662//24981863//22608085 chr4:108047599-108047600(-) m6A CDS//exon       25412662//24981863//26404942//22608085 chr4:108047629-108047630(-) m6A CDS//exon       25412662//24981863//26404942//22608085 chr4:108047808-108047809(-) m6A exon//intron       25412662 chr4:108047876-108047877(-) m6A exon//intron       25412662//22608085 chr4:108055559-108055560(-) m6A CDS//exon//intron       25412662//24981863//22608085 chr4:108063922-108063923(-) m6A CDS//exon       25412662//24981863//25569111//22608085 chr4:108074374-108074375(-) m6A CDS//exon       25683224//25412662//22608085 chr4:108074432-108074433(-) m6A CDS//exon       25683224//25412662//22608085 chr4:108074441-108074442(-) m6A CDS//exon       25683224//25412662//22608085 chr4:108074451-108074452(-) m6A CDS//intron       25683224//25412662//22608085 chr4:108085191-108085192(-) m6A CDS//intron       25683224//25412662//22608085 chr4:108107641-108107642(-) m6A CDS//exon       25569111//22608085 chr4:108112252-108112253(-) m6A CDS//exon       25412662//25569111//22608085 chr4:108112261-108112262(-) m6A CDS//exon       25412662//25569111//22608085//22575960 chr4:108118464-108118465(-) m6A 5'UTR//exon//intron       25412662//24981863//25569111//22608085//22575960 chr4:108118507-108118508(-) m6A 5'UTR//intron       24981863//22575960

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m108-1-3p
Interactor2: Scp2

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar