Detail Information

Basic Information:


  VIRBase ID:  

VHID00621519

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m108-1-3p:           Ptk2b:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol mcmv-miR-m108-1-3p Ptk2b
miRBase
Accession/Entrez ID		 MIMAT0005558 19229
Organism Murid betaherpesvirus 1 Mus musculus
Category miRNA mRNA
Alias - CADTK//CAKB//CAKbe//CAKbeta//E430023O05Rik//FADK2//FAK2//PYK//PYK2//Raf//Raftk

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR Ptk2b
chr14:66783701(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED Ptk2b
chr14:66164864(-) A-I intron -    22524474

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Ptk2b
chr14:66153320-66153321(-) m6A 3'UTR//exon       25456834//24981863//25569111//22608085
chr14:66153439-66153440(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085//22575960
chr14:66153485-66153486(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085//22575960
chr14:66153503-66153504(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085//22575960
chr14:66153520-66153521(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085//22575960
chr14:66153548-66153549(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085//22575960
chr14:66153608-66153609(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085//22575960
chr14:66153655-66153656(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085//22575960
chr14:66153673-66153674(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085//22575960
chr14:66153717-66153718(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085//22575960
chr14:66153847-66153848(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr14:66153860-66153861(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr14:66153869-66153870(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr14:66153894-66153895(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr14:66154099-66154100(-) m6A CDS//exon       25683224//25412662//24981863//22608085
chr14:66154117-66154118(-) m6A CDS//exon       25683224//25412662//24981863//22608085
chr14:66154171-66154172(-) m6A CDS//exon       25412662//24981863//22608085
chr14:66154237-66154238(-) m6A CDS//exon       25412662//24981863//22608085
chr14:66154251-66154252(-) m6A CDS//exon       25683224//25412662//24981863//22608085
chr14:66154259-66154260(-) m6A CDS//exon       25683224//25412662//24981863//22608085
chr14:66155976-66155977(-) m6A CDS//exon       25683224//25412662//24981863//22608085
chr14:66156038-66156039(-) m6A CDS//exon       25683224//25412662//22608085
chr14:66156308-66156309(-) m6A CDS//exon       25683224//25412662//22608085
chr14:66156335-66156336(-) m6A CDS//exon       25683224//25412662//22608085
chr14:66156343-66156344(-) m6A CDS//exon       25683224//25412662//22608085
chr14:66156396-66156397(-) m6A CDS//exon       25412662//22608085
chr14:66156401-66156402(-) m6A CDS//exon       25412662//22608085
chr14:66157081-66157082(-) m6A CDS//exon       25412662//24981863//22608085
chr14:66158029-66158030(-) m6A CDS//intron       25412662//24981863//22608085
chr14:66158587-66158588(-) m6A CDS//exon       25412662//24981863//22608085
chr14:66158669-66158670(-) m6A CDS//exon       25412662//24981863//22608085
chr14:66163898-66163899(-) m6A exon//intron       24981863//22608085
chr14:66165295-66165296(-) m6A CDS       24981863//22608085
chr14:66165308-66165309(-) m6A CDS       24981863//22608085
chr14:66166678-66166679(-) m6A CDS       24981863//22608085
chr14:66166751-66166752(-) m6A CDS       24981863//22608085
chr14:66171792-66171793(-) m6A CDS       25412662//22608085
chr14:66172076-66172077(-) m6A CDS       25412662//22608085
chr14:66172097-66172098(-) m6A CDS       25412662//22608085
chr14:66172504-66172505(-) m6A CDS       25412662//24981863//22608085
chr14:66172516-66172517(-) m6A CDS       25412662//24981863//22608085
chr14:66172529-66172530(-) m6A CDS       25412662//24981863//22608085
chr14:66173844-66173845(-) m6A CDS//exon       25412662//22608085
chr14:66173855-66173856(-) m6A CDS//exon       25412662//22608085
chr14:66173881-66173882(-) m6A CDS//exon       25412662//22608085
chr14:66174792-66174793(-) m6A CDS//exon       25412662//22608085
chr14:66175196-66175197(-) m6A CDS//exon       25412662//22608085
chr14:66177103-66177104(-) m6A CDS//exon       25412662//22608085
chr14:66178857-66178858(-) m6A CDS//exon       25412662//22608085
chr14:66178878-66178879(-) m6A CDS//exon       25412662//22608085
chr14:66189599-66189600(-) m6A CDS//exon       25412662//22608085
chr14:66189604-66189605(-) m6A CDS//exon       25412662//22608085
chr14:66189628-66189629(-) m6A CDS//exon       25412662//22608085
chr14:66190091-66190092(-) m6A CDS//exon       25412662//22608085
chr14:66213351-66213352(-) m6A CDS//exon       25412662//22608085
chr14:66280998-66280999(-) m6A 5'UTR       25412662//24981863//22608085

Interaction Network (The top 100 interactions):


Interactor1: mcmv-miR-m108-1-3p
Interactor2: Ptk2b

Evidence Support:


Prediction-Evidence Rep
Support Database RepTar

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