Basic Information:

  VIRBase ID:  

VHID00621251

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m108-1-3p:  MIMAT0005558          Hnrnpab:  NM_001048061     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m108-1-3p	Hnrnpab
miRBase Accession/Entrez ID	MIMAT0005558	15384
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	3010025C11Rik//CBF-//CBF-A//Cgbf//Cgbfa//Hn//Hnrpab

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Hnrnpab	chr11:51601318-51601319(-) m6A 3'UTR       24981863//22608085 chr11:51601349-51601350(-) m6A 3'UTR       24981863//22608085 chr11:51601847-51601848(-) m6A CDS//intron       25412662//24981863//22608085 chr11:51602609-51602610(-) m6A CDS       25412662//24981863//26404942//22608085 chr11:51604493-51604494(-) m6A CDS       25412662//24981863//22608085 chr11:51604710-51604711(-) m6A CDS       25412662//24981863//25569111//22608085 chr11:51604743-51604744(-) m6A CDS       25412662//25569111//22608085 chr11:51605584-51605585(-) m6A CDS       25683224//25412662//24981863//25569111//22608085 chr11:51606396-51606397(-) m6A CDS       25683224//25412662//24981863//25569111//22608085 chr11:51606418-51606419(-) m6A CDS       25683224//25412662//24981863//25569111//22608085 chr11:51606506-51606507(-) m6A CDS       25683224//25412662//24981863//25569111

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Hnrnpab	Exosome Mast cells     17486113 Nucleus Neuroblastoma cell line (N2A)     22406755 Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m108-1-3p
Interactor2: Hnrnpab

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar