Basic Information:

  VIRBase ID:  

VHID00620966

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m108-1-3p:  MIMAT0005558          Atp7a:  NM_009726     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m108-1-3p	Atp7a
miRBase Accession/Entrez ID	MIMAT0005558	11977
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	b//MN//MNK

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Atp7a	chrX:106027277-106027278(+) m6A 5'UTR       24981863//25569111 chrX:106027358-106027359(+) m6A 5'UTR       24981863//25569111 chrX:106027373-106027374(+) m6A 5'UTR       24981863//25569111 chrX:106069779-106069780(+) m6A 5'UTR       24981863//25569111 chrX:106069859-106069860(+) m6A CDS       25569111 chrX:106069867-106069868(+) m6A CDS       25569111 chrX:106085157-106085158(+) m6A CDS       25456834//24981863//25569111//22608085 chrX:106085164-106085165(+) m6A CDS       25456834//24981863//25569111//22608085 chrX:106085173-106085174(+) m6A CDS       25456834//24981863//25569111//22608085 chrX:106085294-106085295(+) m6A CDS       25456834//24981863//25412662//25569111//22608085 chrX:106085320-106085321(+) m6A CDS       25456834//24981863//25412662//25569111//22608085 chrX:106085426-106085427(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chrX:106085438-106085439(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chrX:106085446-106085447(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chrX:106086097-106086098(+) m6A CDS       25569111//22608085 chrX:106086247-106086248(+) m6A CDS       24981863//25569111 chrX:106086583-106086584(+) m6A CDS       24981863//25569111 chrX:106086622-106086623(+) m6A CDS       25456834//24981863//25569111 chrX:106086718-106086719(+) m6A CDS       24981863//25569111 chrX:106086729-106086730(+) m6A CDS       24981863//25569111 chrX:106086765-106086766(+) m6A CDS       24981863//25569111 chrX:106086787-106086788(+) m6A CDS       24981863//25569111 chrX:106088337-106088338(+) m6A CDS       25569111 chrX:106124347-106124348(+) m6A CDS       25456834//25569111 chrX:106124392-106124393(+) m6A CDS       25456834//24981863//25569111 chrX:106124472-106124473(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chrX:106124535-106124536(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chrX:106124554-106124555(+) m6A CDS       25683224//25456834//24981863//25569111//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Atp7a	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m108-1-3p
Interactor2: Atp7a

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar