Detail Information

Basic Information:


  VIRBase ID:  

VHID00620928

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m108-1-3p:           Akt2:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol mcmv-miR-m108-1-3p Akt2
miRBase
Accession/Entrez ID
MIMAT0005558 11652
Organism Murid betaherpesvirus 1 Mus musculus
Category miRNA mRNA
Alias - 2410016A19Rik//AW554154//PK//PKB//PKBbe//PKBbeta

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Akt2
chr7:27592375-27592376(+) m6A 5'UTR//intron       24981863
chr7:27596941-27596942(+) m6A 5'UTR//intron       25412662
chr7:27596951-27596952(+) m6A 5'UTR//intron       25412662
chr7:27596988-27596989(+) m6A 5'UTR//intron       25412662
chr7:27597004-27597005(+) m6A 5'UTR//intron       25412662
chr7:27597041-27597042(+) m6A 5'UTR//intron       25412662
chr7:27597078-27597079(+) m6A 5'UTR//intron       25412662
chr7:27597144-27597145(+) m6A 5'UTR//intron       25412662
chr7:27616254-27616255(+) m6A CDS//exon//intron       25412662//22608085
chr7:27616335-27616336(+) m6A CDS//exon//intron       25412662//24981863//22608085
chr7:27616351-27616352(+) m6A CDS//intron       25412662//24981863//22608085
chr7:27618224-27618225(+) m6A CDS       25412662//24981863//22608085
chr7:27618272-27618273(+) m6A CDS       25412662//24981863//22608085
chr7:27618290-27618291(+) m6A CDS       25412662//24981863//22608085
chr7:27618303-27618304(+) m6A CDS       25412662//24981863//22608085
chr7:27628533-27628534(+) m6A exon//intron       25412662//24981863//22608085
chr7:27628565-27628566(+) m6A exon//intron       25412662//22608085
chr7:27628645-27628646(+) m6A exon//intron       25412662
chr7:27628679-27628680(+) m6A exon//intron       25412662
chr7:27634645-27634646(+) Y CDS//exon       26075521
chr7:27636057-27636058(+) m6A CDS//exon//intron       25569111
chr7:27636131-27636132(+) m6A CDS//exon//intron       25683224//24981863//25569111//22608085
chr7:27636273-27636274(+) m6A CDS//exon       25683224//24981863//25456834//25569111//22608085
chr7:27636297-27636298(+) m6A CDS//exon       25683224//24981863//25456834//22608085
chr7:27636363-27636364(+) m6A CDS//exon       25683224//24981863//22608085
chr7:27636451-27636452(+) m6A CDS//exon       25569111//22608085
chr7:27636465-27636466(+) m6A CDS//exon       25569111//22608085
chr7:27637108-27637109(+) m6A CDS//exon       24981863//25569111
chr7:27637131-27637132(+) m6A CDS//exon       24981863//25569111
chr7:27637188-27637189(+) m6A CDS//exon       24981863//25569111
chr7:27637207-27637208(+) m6A exon//intron       24981863//25569111
chr7:27637282-27637283(+) m6A exon//intron       24981863//25569111
chr7:27637401-27637402(+) m6A exon//intron       24981863
chr7:27637417-27637418(+) m6A exon//intron       24981863
chr7:27638073-27638074(+) m6A CDS       25683224//24981863
chr7:27638083-27638084(+) m6A CDS       25683224//24981863
chr7:27638088-27638089(+) m6A CDS       25683224//24981863
chr7:27638162-27638163(+) m6A 3'UTR       25683224//24981863//25456834
chr7:27638211-27638212(+) m6A 3'UTR       25683224//24981863//25456834//25569111
chr7:27638291-27638292(+) m6A 3'UTR       25683224//25412662//24981863//25456834//25569111
chr7:27638352-27638353(+) m6A 3'UTR       25683224//25412662//24981863//25456834//25569111
chr7:27638363-27638364(+) m6A 3'UTR       25683224//25412662//24981863//25456834//25569111
chr7:27638472-27638473(+) m6A 3'UTR       25683224//25412662//24981863//25569111
chr7:27638876-27638877(+) m6A 3'UTR       24981863//25569111
chr7:27638895-27638896(+) m6A 3'UTR       24981863//25569111
chr7:27638916-27638917(+) m6A 3'UTR       24981863//25569111
chr7:27639874-27639875(+) m6A 3'UTR       25683224
chr7:27639882-27639883(+) m6A 3'UTR       25683224
chr7:27639911-27639912(+) m6A 3'UTR       25683224
chr7:27639916-27639917(+) m6A 3'UTR       25683224
chr7:27639928-27639929(+) m6A 3'UTR       25683224

Interaction Network (The top 100 interactions):


Interactor1: mcmv-miR-m108-1-3p
Interactor2: Akt2

Evidence Support:


Prediction-Evidence cRep
Support Database RepTar

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