Detail Information

Basic Information:


  VIRBase ID:  

VHID00620922

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m108-1-3p:           Adora1:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol mcmv-miR-m108-1-3p Adora1
miRBase
Accession/Entrez ID		 MIMAT0005558 11539
Organism Murid betaherpesvirus 1 Mus musculus
Category miRNA mRNA
Alias - A//A1//A1-AR//A1AR//A1R//AA1R//AI848715//ARA1//BB176431//Ri

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR Adora1
chr1:136122810(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED Adora1
chr1:134226233(-) A-I intron -    22524474

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Adora1
chr1:134199257-134199258(-) m6A 3'UTR       25683224//24981863
chr1:134199280-134199281(-) Y 3'UTR//exon       26075521
chr1:134199283-134199284(-) m6A 3'UTR       25683224//24981863
chr1:134199303-134199304(-) m6A 3'UTR       25683224//24981863
chr1:134199324-134199325(-) m6A 3'UTR       25683224//24981863
chr1:134199451-134199452(-) m6A 3'UTR       25683224//24981863//22608085
chr1:134199474-134199475(-) m6A 3'UTR       25683224//24981863//22608085
chr1:134199505-134199506(-) m6A 3'UTR       25683224//24981863//22608085
chr1:134199538-134199539(-) m6A 3'UTR       25683224//24981863//22608085
chr1:134199560-134199561(-) m6A 3'UTR       25683224//24981863//26404942//22608085
chr1:134199610-134199611(-) m6A 3'UTR       25683224//24981863//26404942
chr1:134199636-134199637(-) m6A 3'UTR       25683224//24981863//26404942
chr1:134199644-134199645(-) m6A 3'UTR       25683224//24981863
chr1:134199661-134199662(-) m6A 3'UTR       25683224//24981863
chr1:134199736-134199737(-) m6A 3'UTR       25683224//24981863
chr1:134199896-134199897(-) m6A 3'UTR       25683224//22608085
chr1:134199912-134199913(-) m6A 3'UTR       25683224//22608085
chr1:134200025-134200026(-) m6A 3'UTR       25683224//22608085
chr1:134200070-134200071(-) m6A 3'UTR       25683224//22608085
chr1:134200356-134200357(-) m6A 3'UTR       25683224//22608085
chr1:134200989-134200990(-) m6A 3'UTR       25683224//22608085
chr1:134201056-134201057(-) m6A 3'UTR       25683224//22608085
chr1:134201094-134201095(-) m6A 3'UTR       25683224//22608085
chr1:134201554-134201555(-) m6A 3'UTR       25683224//24981863
chr1:134201633-134201634(-) m6A 3'UTR       25683224//24981863
chr1:134201751-134201752(-) m6A 3'UTR//intron       25683224//24981863//22608085
chr1:134201794-134201795(-) m6A 3'UTR//intron       25683224//24981863//22608085
chr1:134201921-134201922(-) m6A 3'UTR//intron       25683224//24981863//25569111//22608085
chr1:134201931-134201932(-) m6A 3'UTR//intron       25683224//24981863//25569111//22608085
chr1:134201936-134201937(-) m6A 3'UTR//intron       25683224//24981863//25569111//22608085
chr1:134201941-134201942(-) m6A 3'UTR//intron       25683224//24981863//25569111//22608085
chr1:134201946-134201947(-) m6A 3'UTR//intron       25683224//24981863//25569111//22608085
chr1:134201951-134201952(-) m6A 3'UTR//intron       25683224//24981863//25569111//22608085
chr1:134201956-134201957(-) m6A 3'UTR//intron       25683224//24981863//25569111//22608085
chr1:134201961-134201962(-) m6A 3'UTR//intron       25683224//24981863//25569111//22608085
chr1:134201966-134201967(-) m6A 3'UTR//intron       25683224//24981863//25569111//22608085
chr1:134202121-134202122(-) m6A 3'UTR       25683224//24981863//25569111//22608085
chr1:134202134-134202135(-) m6A 3'UTR       25683224//24981863//25569111//22608085
chr1:134202206-134202207(-) m6A 3'UTR       25683224//24981863//25569111//22608085//22575960
chr1:134202306-134202307(-) m6A 3'UTR       25683224//24981863//25569111//22608085//22575960
chr1:134202364-134202365(-) m6A 3'UTR       25683224//24981863//25569111//22608085//22575960
chr1:134202448-134202449(-) m6A 3'UTR       25683224//24981863//25569111//22608085//22575960
chr1:134202462-134202463(-) m6A 3'UTR       25683224//24981863//25569111//22608085
chr1:134202548-134202549(-) m6A 3'UTR       25683224//24981863//25569111//22608085
chr1:134202569-134202570(-) m6A 3'UTR       25683224//24981863//25569111//22608085
chr1:134202607-134202608(-) m6A 3'UTR       25683224//24981863//25569111//22608085
chr1:134202753-134202754(-) m6A 3'UTR       25683224//24981863//25569111//22608085
chr1:134202797-134202798(-) m6A 3'UTR       25683224//24981863//25569111//22608085
chr1:134202829-134202830(-) m6A 3'UTR       25683224//24981863//25569111//22608085
chr1:134203080-134203081(-) m6A CDS       25683224//24981863//25569111//22608085
chr1:134203136-134203137(-) m6A CDS       25683224//24981863//25569111//22608085
chr1:134203170-134203171(-) m6A CDS       25683224//24981863//25569111//22608085
chr1:134203472-134203473(-) m6A CDS       25683224//24981863//22608085
chr1:134203491-134203492(-) m6A CDS       25683224//24981863//22608085
chr1:134203582-134203583(-) m6A CDS       25683224//24981863//22608085
chr1:134234132-134234133(-) m6A CDS       25683224//24981863
chr1:134234245-134234246(-) m6A CDS       25683224//24981863//25569111
chr1:134234556-134234557(-) m6A 5'UTR//intron       25683224//24981863//25569111//22608085
chr1:134234569-134234570(-) m6A 5'UTR//intron       25683224//24981863//25569111//22608085
chr1:134234579-134234580(-) m6A 5'UTR//intron       25683224//24981863//25569111//22608085
chr1:134234623-134234624(-) m6A 5'UTR//intron       25683224//24981863//22608085
chr1:134234702-134234703(-) m6A 5'UTR//intron       25683224//24981863//25569111//22608085
chr1:134234756-134234757(-) m6A 5'UTR//intron       25683224//24981863//25569111//22608085
chr1:134234777-134234778(-) m6A 5'UTR//intron       25683224//24981863//25569111//22608085
chr1:134234819-134234820(-) m6A 5'UTR//intron       25683224//24981863//25569111//22608085
chr1:134234953-134234954(-) m6A 5'UTR//intron       25683224//24981863
chr1:134235015-134235016(-) m6A 5'UTR//intron       25683224//24981863
chr1:134235108-134235109(-) m6A 5'UTR//intron       25683224//24981863
chr1:134235272-134235273(-) m6A 5'UTR       25683224//24981863
chr1:134235357-134235358(-) m6A 5'UTR       25569111

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate Adora1
Cytoplasm Neuroblastoma cell line (N2A)     22406755
Cytoplasm Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):


Interactor1: mcmv-miR-m108-1-3p
Interactor2: Adora1

Evidence Support:


Prediction-Evidence cRep
Support Database RepTar

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