Detail Information

Basic Information:


  VIRBase ID:  

VHID00620882

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m107-1-3p:           Adck5:      

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Interactor Information:


Interactor1 Interactor2
Symbol mcmv-miR-m107-1-3p Adck5
miRBase
Accession/Entrez ID
MIMAT0005556 268822
Organism Murid betaherpesvirus 1 Mus musculus
Category miRNA mRNA
Alias - A230108P17

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Adck5
chr15:76576456-76576457(+) m6A 5'UTR//exon       25412662//24981863//25569111
chr15:76576480-76576481(+) m6A 5'UTR//exon       25412662//24981863//25569111
chr15:76587839-76587840(+) m6A CDS//exon       25412662//25569111
chr15:76593265-76593266(+) m6A CDS//exon       25569111
chr15:76594471-76594472(+) m6A exon//intron       25412662
chr15:76594549-76594550(+) m6A 3'UTR//CDS//exon       25412662
chr15:76594560-76594561(+) m6A 3'UTR//CDS//exon       25412662
chr15:76594721-76594722(+) m6A 3'UTR//CDS//exon       25412662
chr15:76594848-76594849(+) m6A 3'UTR//CDS//exon//intron       25412662
chr15:76594893-76594894(+) m6A 3'UTR//CDS//exon//intron       25412662
chr15:76594912-76594913(+) m6A 3'UTR//CDS//exon//intron       25412662
chr15:76594958-76594959(+) m6A exon//intron       25412662
chr15:76595785-76595786(+) m6A 3'UTR//exon       25412662

Interaction Network (The top 100 interactions):


Interactor1: mcmv-miR-m107-1-3p
Interactor2: Adck5

Evidence Support:


Prediction-Evidence cRep
Support Database RepTar

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