Detail Information

Basic Information:


  VIRBase ID:  

VHID00620726

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m107-1-5p:           Hrct1:      

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Interactor Information:


Interactor1 Interactor2
Symbol mcmv-miR-m107-1-5p Hrct1
miRBase
Accession/Entrez ID
MIMAT0005555 100039781
Organism Murid betaherpesvirus 1 Mus musculus
Category miRNA mRNA
Alias - 3830408D24Rik

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Hrct1
chr4:43727273-43727274(+) m6A 5'UTR       25412662
chr4:43727380-43727381(+) m6A CDS       25412662
chr4:43727491-43727492(+) m6A CDS       25683224//25412662
chr4:43727549-43727550(+) m6A CDS       25683224//25412662
chr4:43727802-43727803(+) m6A 3'UTR       25683224
chr4:43727861-43727862(+) m6A 3'UTR       25683224
chr4:43727981-43727982(+) m6A 3'UTR       25683224//25412662
chr4:43728050-43728051(+) m6A 3'UTR       25683224//25412662
chr4:43728119-43728120(+) m6A 3'UTR       25683224

Interaction Network (The top 100 interactions):


Interactor1: mcmv-miR-m107-1-5p
Interactor2: Hrct1

Evidence Support:


Prediction-Evidence cRep
Support Database RepTar

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