Basic Information:

  VIRBase ID:  

VHID00620721

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m107-1-5p:  MIMAT0005555          Trabd2b:  NM_001085549     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m107-1-5p	Trabd2b
miRBase Accession/Entrez ID	MIMAT0005555	666048
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	Gm12824//Hka//Hkat

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Trabd2b	chr4:114406789-114406790(+) m6A 5'UTR       25412662//25569111 chr4:114406897-114406898(+) m6A CDS       25412662//25569111 chr4:114408899-114408900(+) m6A CDS       25412662//25569111 chr4:114408905-114408906(+) m6A CDS       25412662//25569111 chr4:114408919-114408920(+) m6A CDS       25412662//25569111 chr4:114408986-114408987(+) m6A CDS       25569111 chr4:114409112-114409113(+) m6A CDS       25412662//25569111 chr4:114409166-114409167(+) m6A CDS       25412662//24981863//25569111 chr4:114409301-114409302(+) m6A CDS       25412662//24981863//25569111 chr4:114409315-114409316(+) m6A CDS       25412662//24981863//25569111 chr4:114409349-114409350(+) m6A CDS       25412662//24981863//25569111 chr4:114580306-114580307(+) m6A CDS       25412662//25569111 chr4:114580311-114580312(+) m6A CDS       25412662//25569111 chr4:114580372-114580373(+) m6A CDS       25412662 chr4:114580382-114580383(+) m6A CDS       25412662 chr4:114580399-114580400(+) m6A CDS       25412662 chr4:114586596-114586597(+) m6A CDS       25412662 chr4:114586602-114586603(+) m6A CDS       25412662 chr4:114599887-114599888(+) m6A CDS       25412662 chr4:114599912-114599913(+) m6A CDS       25683224//25412662 chr4:114599932-114599933(+) m6A CDS       25683224//25412662 chr4:114602873-114602874(+) m6A CDS       25683224//25412662 chr4:114602955-114602956(+) m6A CDS       25412662 chr4:114602964-114602965(+) m6A CDS       25412662 chr4:114603011-114603012(+) m6A CDS       25412662 chr4:114609976-114609977(+) m6A CDS       25412662 chr4:114610160-114610161(+) m6A 3'UTR       25412662//25569111 chr4:114610239-114610240(+) m6A 3'UTR       25569111 chr4:114610245-114610246(+) m6A 3'UTR       25569111 chr4:114610972-114610973(+) m6A 3'UTR       25412662 chr4:114611007-114611008(+) m6A 3'UTR       25412662 chr4:114611027-114611028(+) m6A 3'UTR       25412662 chr4:114611034-114611035(+) m6A 3'UTR       25412662 chr4:114611093-114611094(+) m6A 3'UTR       25412662 chr4:114611155-114611156(+) m6A 3'UTR       25412662 chr4:114611281-114611282(+) m6A 3'UTR       25412662 chr4:114611304-114611305(+) m6A 3'UTR       25412662//25569111 chr4:114611310-114611311(+) m6A 3'UTR       25412662//25569111 chr4:114611334-114611335(+) m6A 3'UTR       25412662//25569111 chr4:114611403-114611404(+) m6A 3'UTR       25412662//25569111 chr4:114611457-114611458(+) m6A 3'UTR       25412662//25569111 chr4:114611477-114611478(+) m6A 3'UTR       25412662 chr4:114611605-114611606(+) m6A 3'UTR       25412662 chr4:114612566-114612567(+) m6A 3'UTR       25412662 chr4:114612591-114612592(+) m6A 3'UTR       25412662 chr4:114612613-114612614(+) m6A 3'UTR       25412662 chr4:114613882-114613883(+) m6A 3'UTR       25412662 chr4:114613904-114613905(+) m6A 3'UTR       25412662 chr4:114613942-114613943(+) m6A 3'UTR       25412662 chr4:114613965-114613966(+) m6A 3'UTR       25412662

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m107-1-5p
Interactor2: Trabd2b

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar