Basic Information:

  VIRBase ID:  

VHID00620604

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m107-1-5p:  MIMAT0005555          Amigo3:  NM_177275     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m107-1-5p	Amigo3
miRBase Accession/Entrez ID	MIMAT0005555	320844
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	ali3//E430002N15Rik//mKIAA1851

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Amigo3	chr9:108053213-108053214(+) m6A 5'UTR       25412662//24981863//25569111 chr9:108053286-108053287(+) m6A 5'UTR       25412662//24981863//25569111 chr9:108053443-108053444(+) m6A CDS       25412662//24981863//25569111 chr9:108053539-108053540(+) m6A CDS       25683224//25412662//24981863//25569111 chr9:108053573-108053574(+) m6A CDS       25683224//25412662//24981863//25569111 chr9:108053715-108053716(+) m6A CDS       24981863//25569111 chr9:108053824-108053825(+) m6A CDS       25683224//24981863//25569111 chr9:108053937-108053938(+) m6A CDS       25683224//24981863//25569111 chr9:108053944-108053945(+) m6A CDS       25683224//24981863//25569111 chr9:108053966-108053967(+) m6A CDS       24981863//25569111 chr9:108054013-108054014(+) m6A CDS       24981863//25569111 chr9:108054193-108054194(+) m6A CDS       25412662//24981863//25569111 chr9:108054468-108054469(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr9:108054516-108054517(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr9:108054814-108054815(+) m6A CDS       25683224//25412662//24981863//25569111//22608085 chr9:108054906-108054907(+) m6A 3'UTR       25683224//25412662//24981863//25569111 chr9:108054957-108054958(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111 chr9:108055046-108055047(+) m6A 3'UTR       25683224//24981863//25569111 chr9:108055058-108055059(+) m6A 3'UTR       25683224//24981863//25569111 chr9:108055083-108055084(+) m6A 3'UTR       25683224//24981863//25569111 chr9:108055119-108055120(+) m6A 3'UTR       24981863//25569111 chr9:108055161-108055162(+) m6A 3'UTR       24981863 chr9:108055245-108055246(+) m6A 3'UTR       25683224//25412662//24981863 chr9:108055319-108055320(+) m6A 3'UTR       25683224//25412662//24981863//25569111 chr9:108055395-108055396(+) m6A 3'UTR       25683224//25412662//24981863//25569111 chr9:108055437-108055438(+) m6A 3'UTR       25683224//25412662//24981863//25569111 chr9:108055497-108055498(+) m6A 3'UTR       25412662//24981863//25569111 chr9:108055561-108055562(+) m6A 3'UTR       24981863//25569111

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m107-1-5p
Interactor2: Amigo3

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar