Detail Information

Basic Information:


  VIRBase ID:  

VHID00620482

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m107-1-5p:           Tceanc:      

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Interactor Information:


Interactor1 Interactor2
Symbol mcmv-miR-m107-1-5p Tceanc
miRBase
Accession/Entrez ID
MIMAT0005555 245695
Organism Murid betaherpesvirus 1 Mus musculus
Category miRNA mRNA
Alias - A630018P17Rik//Gm390

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Tceanc
chrX:166502386-166502387(-) m6A CDS       25456834//24981863//25569111
chrX:166502396-166502397(-) m6A CDS       25456834//24981863//25569111
chrX:166502430-166502431(-) m6A CDS       25456834//24981863//25569111
chrX:166502496-166502497(-) m6A CDS       25456834//24981863//25569111
chrX:166502530-166502531(-) m6A CDS       25456834//24981863//25569111
chrX:166502575-166502576(-) m6A CDS       25456834//24981863//25569111
chrX:166502591-166502592(-) m6A CDS       25456834//24981863//25569111
chrX:166502631-166502632(-) m6A CDS       25456834//24981863//25569111
chrX:166502645-166502646(-) m6A CDS       25456834//24981863//25569111
chrX:166502672-166502673(-) m6A CDS       25456834//24981863//25569111
chrX:166502706-166502707(-) m6A CDS       25456834//24981863//25569111
chrX:166502726-166502727(-) m6A CDS       25456834//24981863//25569111
chrX:166502771-166502772(-) m6A CDS       25456834//24981863//25569111
chrX:166502833-166502834(-) m6A CDS       25683224//25456834//24981863//25569111
chrX:166503057-166503058(-) m6A CDS       25456834//25569111
chrX:166503142-166503143(-) m6A CDS       25456834//25412662//25569111
chrX:166503224-166503225(-) m6A CDS       25456834//24981863//25412662//25569111
chrX:166503261-166503262(-) m6A CDS       25456834//24981863//25412662//25569111
chrX:166503313-166503314(-) m6A CDS       25456834//25569111
chrX:166503383-166503384(-) m6A CDS       25456834//25569111
chrX:166508992-166508993(-) m6A 5'UTR       25412662
chrX:166518429-166518430(-) m6A 5'UTR       25683224//25412662
chrX:166518441-166518442(-) m6A 5'UTR       25683224//25412662
chrX:166518510-166518511(-) m6A 5'UTR       25412662
chrX:166518556-166518557(-) m6A 5'UTR       25412662

Interaction Network (The top 100 interactions):


Interactor1: mcmv-miR-m107-1-5p
Interactor2: Tceanc

Evidence Support:


Prediction-Evidence cRep
Support Database RepTar

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