Basic Information:

  VIRBase ID:  

VHID00620475

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m107-1-5p:  MIMAT0005555          Peak1:  NM_172924     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m107-1-5p	Peak1
miRBase Accession/Entrez ID	MIMAT0005555	244895
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	1110049L02Rik//9530046P14//AA690169//BE132841//C230081A13Rik//mKIAA2002//SGK269

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	Peak1	chr9:56190475(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Peak1	chr9:56201672-56201673(-) m6A 3'UTR       - chr9:56201911-56201912(-) m6A 3'UTR       25683224//24981863 chr9:56201971-56201972(-) m6A 3'UTR       25683224//24981863 chr9:56203170-56203171(-) m6A 3'UTR       25683224//24981863//25569111 chr9:56203180-56203181(-) m6A 3'UTR       25683224//24981863//25569111 chr9:56203241-56203242(-) m6A 3'UTR       25683224//24981863//25569111 chr9:56203247-56203248(-) m6A 3'UTR       25683224//24981863//25569111 chr9:56203350-56203351(-) m6A 3'UTR       25683224//24981863//25569111 chr9:56203362-56203363(-) m6A 3'UTR       25683224//24981863//25569111 chr9:56203384-56203385(-) m6A 3'UTR       25683224//24981863 chr9:56203927-56203928(-) m6A 3'UTR       25683224//24981863 chr9:56203933-56203934(-) m6A 3'UTR       25683224//24981863 chr9:56204011-56204012(-) m6A 3'UTR       25683224//24981863 chr9:56204346-56204347(-) m6A 3'UTR       24981863 chr9:56204404-56204405(-) m6A 3'UTR       24981863//25569111 chr9:56204419-56204420(-) m6A 3'UTR       24981863//25569111 chr9:56204443-56204444(-) m6A 3'UTR       24981863//25569111 chr9:56204587-56204588(-) m6A 3'UTR       25683224//25569111 chr9:56204738-56204739(-) m6A 3'UTR       24981863 chr9:56204746-56204747(-) m6A 3'UTR       24981863 chr9:56205013-56205014(-) m6A 3'UTR       25683224//25569111 chr9:56205116-56205117(-) m6A 3'UTR       25683224//24981863//25569111 chr9:56205286-56205287(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr9:56205322-56205323(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr9:56205391-56205392(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr9:56205606-56205607(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr9:56205642-56205643(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr9:56205895-56205896(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr9:56205931-56205932(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr9:56205972-56205973(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr9:56206231-56206232(-) m6A 3'UTR       24981863//25569111 chr9:56206319-56206320(-) m6A 3'UTR       24981863//25569111//22608085 chr9:56206487-56206488(-) m6A CDS       25683224//25456834//24981863//25569111//22608085//22575960 chr9:56206526-56206527(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr9:56206553-56206554(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr9:56206590-56206591(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr9:56206601-56206602(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr9:56206610-56206611(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr9:56206853-56206854(-) m6A CDS       25683224//24981863//25569111 chr9:56206970-56206971(-) m6A CDS       25683224//25412662//24981863//25569111 chr9:56206988-56206989(-) m6A CDS       25683224//25412662//24981863//25569111 chr9:56207069-56207070(-) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr9:56207126-56207127(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr9:56207237-56207238(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr9:56207326-56207327(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr9:56207333-56207334(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr9:56207348-56207349(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr9:56207370-56207371(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr9:56207403-56207404(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr9:56207429-56207430(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr9:56223763-56223764(-) m6A intron       25683224//22608085 chr9:56223910-56223911(-) Y intron       27510903 chr9:56227179-56227180(-) m6A CDS       24981863//25569111 chr9:56227201-56227202(-) m6A CDS       24981863//25569111 chr9:56227213-56227214(-) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr9:56227234-56227235(-) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr9:56227258-56227259(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr9:56227278-56227279(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr9:56227311-56227312(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr9:56227341-56227342(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr9:56227359-56227360(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr9:56227385-56227386(-) m6A CDS       25456834 chr9:56227389-56227390(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr9:56227444-56227445(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr9:56227480-56227481(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr9:56227500-56227501(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr9:56227518-56227519(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr9:56227551-56227552(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr9:56227560-56227561(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr9:56227666-56227667(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr9:56227743-56227744(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr9:56227757-56227758(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr9:56241294-56241295(-) m6A CDS       25683224//25412662//25569111 chr9:56241316-56241317(-) m6A CDS       25683224//25412662//25569111 chr9:56243963-56243964(-) m6A CDS//intron       25683224//25412662//25569111 chr9:56244014-56244015(-) m6A 5'UTR//intron       25683224//25412662//24981863//25569111 chr9:56244055-56244056(-) m6A 5'UTR//intron       25683224//25412662//24981863//25569111 chr9:56257583-56257584(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr9:56257637-56257638(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr9:56257773-56257774(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr9:56257836-56257837(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr9:56257882-56257883(-) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr9:56258145-56258146(-) m6A CDS       25683224//24981863//25569111 chr9:56258197-56258198(-) m6A CDS       25683224//24981863//25569111 chr9:56258210-56258211(-) m6A CDS       25683224//24981863//25569111 chr9:56258310-56258311(-) m6A CDS       25683224//25412662//24981863//25569111 chr9:56258443-56258444(-) m6A CDS       25683224//25412662//24981863//25569111 chr9:56258600-56258601(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr9:56258643-56258644(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr9:56258682-56258683(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr9:56258701-56258702(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr9:56258712-56258713(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr9:56258907-56258908(-) m6A CDS       25683224//24981863//25569111//22608085 chr9:56258921-56258922(-) m6A CDS       25683224//24981863//25569111//22608085 chr9:56258960-56258961(-) m6A CDS       25683224//24981863//25569111//22608085 chr9:56258989-56258990(-) m6A CDS       25683224//24981863//25569111//22608085 chr9:56259100-56259101(-) m6A CDS       25683224//24981863//25569111 chr9:56259134-56259135(-) m6A CDS       25683224//24981863//25569111 chr9:56259235-56259236(-) m6A CDS       25683224//24981863//25569111 chr9:56259268-56259269(-) m6A CDS       25683224//24981863//25569111//22608085 chr9:56259492-56259493(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr9:56259503-56259504(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr9:56259573-56259574(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr9:56259716-56259717(-) m6A CDS       25683224//24981863//25569111 chr9:56259806-56259807(-) m6A CDS       25683224//24981863//25569111 chr9:56260018-56260019(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr9:56260031-56260032(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr9:56260116-56260117(-) m6A CDS       25683224//24981863//25569111 chr9:56260131-56260132(-) m6A CDS       25683224//24981863//25569111 chr9:56260300-56260301(-) m6A CDS       25683224//24981863//25569111 chr9:56260322-56260323(-) m6A CDS       25683224//24981863//25569111 chr9:56260328-56260329(-) m6A CDS       25683224//24981863//25569111 chr9:56260352-56260353(-) m6A CDS       25683224//24981863//25569111 chr9:56260363-56260364(-) m6A CDS       25683224//24981863//25569111 chr9:56260509-56260510(-) m6A CDS       25683224//24981863//25569111 chr9:56260547-56260548(-) m6A CDS       25683224//24981863//25569111 chr9:56260576-56260577(-) m6A CDS       25683224//24981863//25569111 chr9:56260603-56260604(-) m6A CDS       25683224//24981863//25569111 chr9:56260615-56260616(-) m6A CDS       25683224//24981863//25569111 chr9:56260714-56260715(-) m6A 5'UTR       25683224//24981863//25569111 chr9:56318706-56318707(-) m6A 5'UTR//intron       25683224//25569111 chr9:56318816-56318817(-) m6A 5'UTR//intron       25683224//24981863 chr9:56374381-56374382(-) m6A 5'UTR       25683224//24981863 chr9:56374420-56374421(-) m6A 5'UTR       25683224//24981863 chr9:56416722-56416723(-) m6A exon//intron       25683224//24981863 chr9:56417984-56417985(-) m6A 5'UTR//exon       25683224//25412662//24981863//25569111 chr9:56418062-56418063(-) m6A 5'UTR       25683224//25412662//24981863//25569111

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m107-1-5p
Interactor2: Peak1

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar