Basic Information:

  VIRBase ID:  

VHID00620449

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m107-1-5p:  MIMAT0005555          Podn:  NM_172874     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m107-1-5p	Podn
miRBase Accession/Entrez ID	MIMAT0005555	242608
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	9430070G18//Pcan//S//SLRR5A

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Podn	chr4:108015678-108015679(-) m6A 3'UTR//exon//intron       25412662 chr4:108015686-108015687(-) m6A 3'UTR//exon//intron       25412662 chr4:108017711-108017712(-) m6A 3'UTR//exon//intron       25683224//25412662//25569111 chr4:108017730-108017731(-) m6A 3'UTR//exon//intron       25683224//25412662//25569111 chr4:108017740-108017741(-) m6A CDS//exon//intron       25683224//25412662//25569111 chr4:108017793-108017794(-) m6A CDS//exon//intron       25683224//25412662 chr4:108017832-108017833(-) m6A CDS//exon//intron       25683224//25412662 chr4:108017849-108017850(-) m6A CDS//exon//intron       25683224//25412662 chr4:108018934-108018935(-) m6A CDS//exon//intron       25412662//25569111 chr4:108021169-108021170(-) m6A CDS//exon//intron       25412662//25569111 chr4:108021186-108021187(-) m6A CDS//exon//intron       25412662//25569111 chr4:108021228-108021229(-) m6A CDS//exon       25412662//24981863//25569111 chr4:108021335-108021336(-) m6A CDS//exon       25456834//25412662//25569111 chr4:108021469-108021470(-) m6A CDS//exon       25569111 chr4:108025535-108025536(-) m6A CDS//exon       25412662 chr4:108025544-108025545(-) m6A CDS//exon       25412662 chr4:108027045-108027046(-) m6A CDS//exon       25412662 chr4:108044725-108044726(-) m6A intron       25412662//22608085 chr4:108044783-108044784(-) m6A intron       25412662//24981863 chr4:108044791-108044792(-) m6A intron       25412662//24981863 chr4:108044803-108044804(-) m6A intron       25412662//24981863//22608085 chr4:108044827-108044828(-) m6A intron       25412662//24981863//22608085 chr4:108047599-108047600(-) m6A intron       25412662//24981863//26404942//22608085 chr4:108047629-108047630(-) m6A intron       25412662//24981863//26404942//22608085 chr4:108047808-108047809(-) m6A intron       25412662 chr4:108047876-108047877(-) m6A intron       25412662//22608085 chr4:108055559-108055560(-) m6A intron       25412662//24981863//22608085 chr4:108063922-108063923(-) m6A intron       25412662//24981863//25569111//22608085 chr4:108074374-108074375(-) m6A intron       25683224//25412662//22608085 chr4:108074432-108074433(-) m6A intron       25683224//25412662//22608085 chr4:108074441-108074442(-) m6A intron       25683224//25412662//22608085 chr4:108074451-108074452(-) m6A intron       25683224//25412662//22608085 chr4:108085191-108085192(-) m6A intron       25683224//25412662//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Podn	Exosome Mast cells     17486113

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m107-1-5p
Interactor2: Podn

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar