Basic Information:

  VIRBase ID:  

VHID00620420

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m107-1-5p:  MIMAT0005555          Pced1b:  NM_172293     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m107-1-5p	Pced1b
miRBase Accession/Entrez ID	MIMAT0005555	239647
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	Fam113//Fam113b

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Pced1b	chr15:97277361-97277362(+) m6A 5'UTR       25412662 chr15:97361303-97361304(+) m6A 5'UTR       24981863 chr15:97361308-97361309(+) m6A 5'UTR       24981863 chr15:97361331-97361332(+) m6A 5'UTR       24981863 chr15:97373985-97373986(+) m6A 5'UTR       24981863 chr15:97374021-97374022(+) m6A 5'UTR       24981863 chr15:97374038-97374039(+) m6A 5'UTR       25456834//24981863 chr15:97374076-97374077(+) m6A 5'UTR       25456834//24981863 chr15:97384034-97384035(+) m6A 5'UTR       25683224//25456834//24981863//25569111//22608085 chr15:97384148-97384149(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr15:97384175-97384176(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr15:97384228-97384229(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr15:97384256-97384257(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr15:97384304-97384305(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr15:97384445-97384446(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr15:97384505-97384506(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr15:97384514-97384515(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr15:97384532-97384533(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr15:97384568-97384569(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr15:97384730-97384731(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr15:97384871-97384872(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22575960 chr15:97384937-97384938(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22575960 chr15:97384947-97384948(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr15:97384986-97384987(+) m6A CDS       25683224//24981863//25456834//25569111 chr15:97385114-97385115(+) m6A CDS       25683224//24981863//25456834

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m107-1-5p
Interactor2: Pced1b

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar