Detail Information

Basic Information:


  VIRBase ID:  

VHID00620416

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m107-1-5p:           Kctd12:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol mcmv-miR-m107-1-5p Kctd12
miRBase
Accession/Entrez ID		 MIMAT0005555 239217
Organism Murid betaherpesvirus 1 Mus musculus
Category miRNA mRNA
Alias - AU046135//AW538430//Pfe//Pfet//Pfet1//Pfetin

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Kctd12
chr14:102977009-102977010(-) m6A 3'UTR       24981863//26404942
chr14:102977035-102977036(-) m6A 3'UTR       24981863//26404942
chr14:102977117-102977118(-) m6A 3'UTR       24981863//26404942
chr14:102977157-102977158(-) m6A 3'UTR       26404942
chr14:102977175-102977176(-) m6A 3'UTR       26404942
chr14:102977939-102977940(-) m6A 3'UTR//exon       24981863//25569111//22608085
chr14:102978411-102978412(-) m6A 3'UTR//intron       25683224//24981863//25569111//26404942
chr14:102978465-102978466(-) m6A 3'UTR//intron       25683224//24981863//25569111//26404942
chr14:102978531-102978532(-) m6A 3'UTR//intron       25683224//24981863//25569111//26404942
chr14:102978656-102978657(-) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//26404942//22608085
chr14:102978708-102978709(-) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//26404942//22608085
chr14:102978719-102978720(-) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//26404942//22608085
chr14:102978781-102978782(-) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//26404942//22608085
chr14:102978856-102978857(-) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//26404942//22608085
chr14:102978939-102978940(-) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//26404942//22608085
chr14:102978951-102978952(-) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//26404942//22608085//22575960
chr14:102978991-102978992(-) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//26404942//22608085//22575960
chr14:102979010-102979011(-) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//26404942//22608085//22575960
chr14:102979042-102979043(-) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//26404942//22608085//22575960
chr14:102979072-102979073(-) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//22608085//22575960
chr14:102979347-102979348(-) m6A 3'UTR//intron       24981863
chr14:102979362-102979363(-) m6A 3'UTR//intron       24981863
chr14:102979504-102979505(-) m6A 3'UTR//intron       24981863//26404942
chr14:102979539-102979540(-) m6A 3'UTR//intron       24981863//26404942
chr14:102979555-102979556(-) m6A 3'UTR//intron       24981863//26404942
chr14:102979605-102979606(-) m6A 3'UTR//intron       24981863//26404942
chr14:102979903-102979904(-) m6A 3'UTR//intron       25456834//24981863//25569111//26404942//22608085
chr14:102979910-102979911(-) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//22608085
chr14:102980097-102980098(-) m6A 3'UTR//intron       25683224//24981863
chr14:102980103-102980104(-) m6A 3'UTR//intron       25683224//24981863
chr14:102980428-102980429(-) m6A 3'UTR//intron       24981863
chr14:102980441-102980442(-) m6A 3'UTR//intron       24981863
chr14:102980517-102980518(-) m6A 3'UTR//intron       25683224//24981863//25569111
chr14:102980576-102980577(-) m6A 3'UTR//intron       25683224//24981863//25569111
chr14:102980602-102980603(-) m6A 3'UTR//intron       25683224//24981863//25569111
chr14:102980894-102980895(-) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//26404942//22608085
chr14:102980916-102980917(-) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//26404942//22608085//22575960
chr14:102980931-102980932(-) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//26404942//22608085//22575960
chr14:102980946-102980947(-) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//26404942//22608085//22575960
chr14:102981021-102981022(-) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//22608085//22575960
chr14:102981055-102981056(-) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//26404942//22608085//22575960
chr14:102981147-102981148(-) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//22608085//22575960
chr14:102981249-102981250(-) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//22608085//22575960
chr14:102981314-102981315(-) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//22608085//22575960
chr14:102981397-102981398(-) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//22608085
chr14:102981491-102981492(-) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085//22575960
chr14:102981502-102981503(-) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085//22575960
chr14:102981661-102981662(-) m6A CDS       25683224//25456834//24981863//25569111//22608085
chr14:102981682-102981683(-) m6A CDS       25683224//25456834//24981863//25569111//22608085
chr14:102982147-102982148(-) m6A CDS       25683224//24981863//25569111//22608085
chr14:102982192-102982193(-) m6A CDS       25683224//25456834//24981863//25569111//22608085
chr14:102982216-102982217(-) m6A CDS       25683224//25456834//24981863//25569111//22608085
chr14:102982339-102982340(-) m6A CDS       25683224//24981863//25569111//22608085
chr14:102982426-102982427(-) m6A CDS       25683224//24981863//25569111

Interaction Network (The top 100 interactions):


Interactor1: mcmv-miR-m107-1-5p
Interactor2: Kctd12

Evidence Support:


Prediction-Evidence cRep//Rep
Support Database RepTar

Starting a new search, please wait ...