Basic Information:

  VIRBase ID:  

VHID00619871

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m107-1-5p:  MIMAT0005555          Champ1:  NM_001363455     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m107-1-5p	Champ1
miRBase Accession/Entrez ID	MIMAT0005555	101994
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	AA675043//AI116001//D8Ertd457//D8Ertd457e//D8Ertd569//D8Ertd569e//mKIAA1802//Zfp82//Zfp828//Znf828

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Champ1	chr8:13877869-13877870(+) m6A CDS       25569111//22608085 chr8:13878094-13878095(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr8:13878108-13878109(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr8:13878147-13878148(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr8:13878189-13878190(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr8:13878405-13878406(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr8:13878490-13878491(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr8:13878516-13878517(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr8:13878577-13878578(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr8:13878586-13878587(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr8:13878629-13878630(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr8:13878676-13878677(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr8:13878718-13878719(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr8:13878808-13878809(+) m6A CDS       25683224//25456834//24981863//25569111 chr8:13878826-13878827(+) m6A CDS       25683224//25456834//24981863//25569111 chr8:13878850-13878851(+) m6A CDS       25683224//25456834//24981863//25569111 chr8:13878859-13878860(+) m6A CDS       25683224//25456834//24981863//25569111 chr8:13878892-13878893(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr8:13878953-13878954(+) m6A CDS       25683224//25412662//24981863//25569111 chr8:13878997-13878998(+) m6A CDS       25683224//25412662//24981863//25569111 chr8:13879007-13879008(+) m6A CDS       25683224//25412662//24981863//25569111 chr8:13879072-13879073(+) m6A CDS       25683224//25412662//24981863//25569111 chr8:13879149-13879150(+) m6A CDS       25683224//25412662//24981863//25569111 chr8:13879181-13879182(+) m6A CDS       25683224//25412662//24981863//25569111 chr8:13879279-13879280(+) m6A CDS       24981863//25569111 chr8:13879350-13879351(+) m6A CDS       25683224//25412662//24981863//25569111//22608085 chr8:13879498-13879499(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr8:13879630-13879631(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr8:13879677-13879678(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr8:13879689-13879690(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr8:13879737-13879738(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr8:13879746-13879747(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr8:13879780-13879781(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr8:13879818-13879819(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr8:13880076-13880077(+) m6A CDS       25683224//25456834//24981863//25569111//26404942//22608085 chr8:13880158-13880159(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//26404942//22608085 chr8:13880259-13880260(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr8:13880293-13880294(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr8:13880322-13880323(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr8:13881006-13881007(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr8:13881095-13881096(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr8:13881147-13881148(+) m6A 3'UTR       25683224//25456834//24981863//25569111 chr8:13881326-13881327(+) m6A 3'UTR       24981863 chr8:13881383-13881384(+) m6A 3'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Champ1	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m107-1-5p
Interactor2: Champ1

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar