Basic Information:

  VIRBase ID:  

VHID00619575

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m107-1-5p:  MIMAT0005555          Bclaf1:  NM_153787     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m107-1-5p	Bclaf1
miRBase Accession/Entrez ID	MIMAT0005555	72567
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	2610102K23Rik//2700025J07Rik//2810454G14Rik//5730534O06Rik//AI450190//AW556225//Btf//mKIAA0164

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	Bclaf1	chr10:20038308(+) A-I      intronic chr10:20056015(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	Bclaf1	chr10:20336209(+) A-I intron -    22524474

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Bclaf1	chr10:20312571-20312572(+) m6A 5'UTR//exon       24981863//25569111//22608085 chr10:20318075-20318076(+) m6A 5'UTR//exon       24981863//22608085 chr10:20322981-20322982(+) m6A CDS       24981863//22608085 chr10:20323139-20323140(+) m6A CDS       24981863 chr10:20323349-20323350(+) m6A CDS       24981863//25569111 chr10:20323373-20323374(+) m6A CDS       24981863//25569111 chr10:20323415-20323416(+) m6A CDS       24981863//25569111 chr10:20323433-20323434(+) m6A CDS       24981863 chr10:20323764-20323765(+) m6A CDS       25683224//25412662//24981863//25569111//22608085 chr10:20323839-20323840(+) m6A CDS       25683224//25412662//24981863 chr10:20323848-20323849(+) m6A CDS       25683224//25412662//24981863 chr10:20325295-20325296(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr10:20325335-20325336(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr10:20325349-20325350(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr10:20325427-20325428(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr10:20325502-20325503(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr10:20325512-20325513(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr10:20325549-20325550(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr10:20325567-20325568(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr10:20325766-20325767(+) m6A CDS       25412662//24981863 chr10:20325949-20325950(+) m6A CDS       25412662//22608085 chr10:20327370-20327371(+) m6A 3'UTR//intron       24981863 chr10:20328171-20328172(+) m6A 3'UTR//CDS       24981863 chr10:20329164-20329165(+) m6A exon//intron       24981863 chr10:20329261-20329262(+) m6A exon//intron       24981863 chr10:20332217-20332218(+) m6A 3'UTR//CDS//exon       25683224//24981863 chr10:20332243-20332244(+) m6A 3'UTR//CDS//exon       25683224//24981863 chr10:20332370-20332371(+) m6A exon//intron       25683224 chr10:20333335-20333336(+) m6A exon//intron       24981863 chr10:20333365-20333366(+) m6A exon//intron       24981863 chr10:20333394-20333395(+) m6A 3'UTR//CDS//exon       24981863 chr10:20333414-20333415(+) m6A 3'UTR//CDS//exon       24981863 chr10:20333509-20333510(+) m6A 3'UTR//CDS//exon       24981863 chr10:20333528-20333529(+) m6A 3'UTR//CDS//exon       24981863 chr10:20333556-20333557(+) m6A 3'UTR//CDS//exon       24981863 chr10:20333566-20333567(+) m6A 3'UTR//CDS//exon       24981863 chr10:20333619-20333620(+) m6A exon//intron       25412662//24981863 chr10:20333635-20333636(+) m6A exon//intron       25412662//24981863 chr10:20333851-20333852(+) m6A exon//intron       24981863 chr10:20334543-20334544(+) m6A CDS//exon//intron       24981863 chr10:20334559-20334560(+) m6A CDS//exon//intron       24981863 chr10:20334587-20334588(+) m6A CDS//exon//intron       24981863 chr10:20339825-20339826(+) m6A 3'UTR//CDS//exon       25412662//24981863//25456834//25569111 chr10:20339873-20339874(+) m6A 3'UTR//CDS//exon       25412662//24981863//25456834//25569111 chr10:20339901-20339902(+) m6A 3'UTR//CDS//exon       25412662//24981863//25456834//25569111 chr10:20340082-20340083(+) m6A 3'UTR//exon       25412662//24981863//25456834//25569111 chr10:20340105-20340106(+) m6A 3'UTR//exon       25412662//24981863//25456834 chr10:20340149-20340150(+) m6A 3'UTR//exon//intron       24981863 chr10:20340581-20340582(+) m6A 3'UTR//intron       24981863 chr10:20340602-20340603(+) m6A 3'UTR//intron       24981863 chr10:20340613-20340614(+) m6A 3'UTR//intron       24981863 chr10:20340683-20340684(+) m6A 3'UTR//intron       24981863//25569111 chr10:20340711-20340712(+) m6A 3'UTR//intron       24981863//25569111 chr10:20340988-20340989(+) m6A 3'UTR//intron       22608085 chr10:20342422-20342423(+) m6A 3'UTR//intron       24981863 chr10:20342456-20342457(+) m6A 3'UTR//intron       24981863 chr10:20344385-20344386(+) m6A 3'UTR       25683224//24981863 chr10:20344416-20344417(+) m6A 3'UTR       25683224//24981863 chr10:20344450-20344451(+) m6A 3'UTR       25683224//24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Bclaf1	Nucleus Neuroblastoma cell line (N2A)     22406755 Nucleus Neuroblastoma cell line (N2A)     22406755 Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m107-1-5p
Interactor2: Bclaf1

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar