Basic Information:

  VIRBase ID:  

VHID00619235

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m107-1-5p:  MIMAT0005555          Ireb2:  NM_022655     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m107-1-5p	Ireb2
miRBase Accession/Entrez ID	MIMAT0005555	64602
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	D9Ertd85//D9Ertd85e//I//Irp2

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	Ireb2	chr9:54731003(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	Ireb2	chr9:54883196(+) A-I intron -    22524474

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Ireb2	chr9:54863757-54863758(+) m6A 5'UTR       24981863//25569111 chr9:54863881-54863882(+) m6A CDS       24981863//25569111 chr9:54865332-54865333(+) m6A CDS       25569111 chr9:54865356-54865357(+) m1A CDS       26863196 chr9:54906709-54906710(+) m6A CDS       25569111//22608085 chr9:54906823-54906824(+) m6A CDS       25569111//22608085 chr9:54906910-54906911(+) m6A CDS       25569111//22608085 chr9:54908896-54908897(+) m6A CDS       25456834//24981863//25569111 chr9:54909698-54909699(+) m6A CDS       25683224//25456834//24981863//25569111//26404942//22608085//22575960 chr9:54909715-54909716(+) m6A CDS       25683224//25456834//24981863//25569111//26404942//22608085//22575960 chr9:54909797-54909798(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085//22575960 chr9:54909819-54909820(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085//22575960 chr9:54909971-54909972(+) m6A 3'UTR       25456834//24981863//25569111//26404942//22608085 chr9:54910003-54910004(+) m6A 3'UTR       25456834//24981863//25569111//22608085 chr9:54910020-54910021(+) m6A 3'UTR       25456834//24981863//25569111//22608085 chr9:54910031-54910032(+) m6A 3'UTR       25456834//24981863//25569111//22608085 chr9:54910096-54910097(+) m6A 3'UTR       25456834//24981863//25569111 chr9:54910101-54910102(+) m6A 3'UTR       25456834//24981863//25569111 chr9:54910150-54910151(+) m6A 3'UTR       24981863//25569111 chr9:54910155-54910156(+) m6A 3'UTR       24981863//25569111 chr9:54910234-54910235(+) m6A 3'UTR       25569111//22608085 chr9:54912137-54912138(+) m6A 3'UTR       24981863 chr9:54912197-54912198(+) m6A 3'UTR       25683224//24981863//26404942//22608085 chr9:54912247-54912248(+) m6A 3'UTR       25683224//24981863//26404942 chr9:54912342-54912343(+) m6A 3'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Ireb2	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m107-1-5p
Interactor2: Ireb2

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar