Basic Information:

  VIRBase ID:  

VHID00619057

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m107-1-5p:  MIMAT0005555          Mapk6:  NM_015806     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m107-1-5p	Mapk6
miRBase Accession/Entrez ID	MIMAT0005555	50772
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	2610021I23Rik//D130053K17Rik//ERK//Erk3//Map//Mapk//Mapk4//Mapk63//Prk//Prkm4//Prkm6

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Mapk6	chr9:75387649-75387650(-) m6A 3'UTR//intron       24981863//26404942 chr9:75387690-75387691(-) m6A 3'UTR//intron       24981863//26404942 chr9:75387704-75387705(-) m6A 3'UTR//intron       24981863//26404942 chr9:75387717-75387718(-) m6A 3'UTR//intron       24981863//26404942 chr9:75387722-75387723(-) m6A 3'UTR//intron       24981863//26404942 chr9:75387745-75387746(-) m6A 3'UTR//intron       24981863 chr9:75387757-75387758(-) m6A 3'UTR//intron       24981863 chr9:75387780-75387781(-) m6A 3'UTR//intron       24981863 chr9:75387800-75387801(-) m6A 3'UTR//intron       24981863 chr9:75387868-75387869(-) m6A 3'UTR//intron       24981863 chr9:75387908-75387909(-) m6A 3'UTR//intron       24981863 chr9:75388040-75388041(-) m6A 3'UTR//intron       24981863 chr9:75388050-75388051(-) m6A 3'UTR//intron       24981863 chr9:75388055-75388056(-) m6A CDS//intron       24981863 chr9:75388063-75388064(-) m6A CDS//intron       24981863 chr9:75388083-75388084(-) m6A CDS//intron       24981863 chr9:75388287-75388288(-) m6A CDS//intron       24981863 chr9:75388328-75388329(-) m6A CDS//intron       25683224//24981863 chr9:75388349-75388350(-) m6A CDS//intron       25683224//24981863//25569111 chr9:75388439-75388440(-) m6A CDS//intron       25683224//25456834//24981863//25569111 chr9:75388620-75388621(-) m6A CDS//intron       25683224//25412662//24981863//25569111 chr9:75388872-75388873(-) m6A CDS//intron       25456834//24981863//25569111 chr9:75388916-75388917(-) m6A CDS//exon       25456834//25412662//24981863//25569111//26404942//22608085 chr9:75388948-75388949(-) m6A CDS//exon       25456834//25412662//24981863//25569111//26404942//22608085 chr9:75389000-75389001(-) m6A CDS//exon       25456834//25412662//24981863//25569111//22608085 chr9:75390194-75390195(-) m6A CDS       24981863//25569111//22608085 chr9:75390325-75390326(-) m6A CDS       25412662//24981863//25569111//22608085 chr9:75393104-75393105(-) m6A exon//intron       25412662//24981863//25569111//22608085 chr9:75393401-75393402(-) m6A CDS//exon       25569111//22608085 chr9:75393512-75393513(-) m6A CDS//exon       25569111//22608085 chr9:75393518-75393519(-) m6A CDS//exon       25569111//22608085 chr9:75393737-75393738(-) m6A exon//intron       25569111//22608085 chr9:75397642-75397643(-) m6A CDS//exon       24981863//25456834//25569111//22608085 chr9:75397796-75397797(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//26404942//22608085 chr9:75397920-75397921(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//26404942//22608085 chr9:75397953-75397954(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//26404942//22608085 chr9:75398017-75398018(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr9:75398061-75398062(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr9:75398068-75398069(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr9:75398104-75398105(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr9:75398261-75398262(-) m6A 5'UTR//exon       25683224//25456834//24981863//25412662//25569111//22608085 chr9:75398271-75398272(-) m6A 5'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr9:75398302-75398303(-) m6A 5'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr9:75398371-75398372(-) m6A 5'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr9:75398567-75398568(-) m6A 5'UTR//exon       24981863//25412662//25569111 chr9:75398603-75398604(-) m6A 5'UTR//exon       25412662//24981863//25569111//22608085 chr9:75398636-75398637(-) m6A 5'UTR//exon       25412662//24981863//25569111//22608085 chr9:75409216-75409217(-) m6A 5'UTR//exon//intron       25683224//25412662//25569111 chr9:75409263-75409264(-) m6A 5'UTR//exon//intron       25683224//25412662 chr9:75409274-75409275(-) m6A 5'UTR//exon//intron       25683224//25412662 chr9:75409925-75409926(-) m6A 5'UTR//exon       25412662//25569111//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Mapk6	Nucleus Neuroblastoma cell line (N2A)     22406755 Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m107-1-5p
Interactor2: Mapk6

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar