Basic Information:

  VIRBase ID:  

VHID00618899

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m107-1-5p:  MIMAT0005555          Tfam:  NM_009360     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m107-1-5p	Tfam
miRBase Accession/Entrez ID	MIMAT0005555	21780
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	AI661103//Hmgt//Hmgts//mtTF//mtTFA//tsHM//tsHMG

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Tfam	chr10:71226581-71226582(-) m6A 3'UTR       24981863 chr10:71226914-71226915(-) m6A 3'UTR       24981863 chr10:71226955-71226956(-) m6A 3'UTR       24981863 chr10:71226980-71226981(-) m6A 3'UTR       24981863 chr10:71227025-71227026(-) m6A 3'UTR       24981863 chr10:71227041-71227042(-) m6A 3'UTR       24981863 chr10:71227126-71227127(-) m6A 3'UTR       - chr10:71227133-71227134(-) m6A 3'UTR       - chr10:71227781-71227782(-) m6A 3'UTR       25569111 chr10:71227859-71227860(-) m6A 3'UTR       25569111 chr10:71228106-71228107(-) m6A 3'UTR       24981863//25569111 chr10:71228191-71228192(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr10:71228295-71228296(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr10:71228352-71228353(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr10:71228364-71228365(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr10:71228427-71228428(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr10:71228486-71228487(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960 chr10:71228518-71228519(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//26404942//22608085 chr10:71228574-71228575(-) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085 chr10:71233422-71233423(-) m6A CDS//exon       25569111//22608085 chr10:71233431-71233432(-) m6A CDS//exon       24981863//25569111//22608085 chr10:71237977-71237978(-) m6A 5'UTR//intron       24981863//25569111 chr10:71238091-71238092(-) m6A 5'UTR//intron       24981863//25456834//25569111

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Tfam	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m107-1-5p
Interactor2: Tfam

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar