Detail

Basic Information:

VIRBase ID:

VHID00618524

Virus:

Murid betaherpesvirus 1

Host:

Mus musculus

Confidence Score:

0.1828

Interaction Type:

Virus-Host interaction

Predicted Binding:

*It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m107-1-5p	Hccs
miRBase Accession/Entrez ID	MIMAT0005555	15159
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	-

RNA Modification:

Resource

Symbol

ModificationPosition

Type

Genomic Context

PMID

RMBase

Hccs

chrX:169312083-169312084(-)	m6A	3'UTR//intron	24981863
chrX:169312751-169312752(-)	m6A	3'UTR//intron	25569111//22608085
chrX:169312765-169312766(-)	m6A	3'UTR//intron	24981863//25569111//22608085
chrX:169312791-169312792(-)	m6A	3'UTR//intron	24981863//25569111//22608085
chrX:169312831-169312832(-)	m6A	CDS//intron	24981863//25569111
chrX:169312860-169312861(-)	m6A	CDS//intron	24981863//25569111
chrX:169312926-169312927(-)	m6A	CDS//intron	25569111
chrX:169316577-169316578(-)	m6A	CDS//intron	24981863
chrX:169316675-169316676(-)	m6A	CDS//intron	24981863//22608085
chrX:169316999-169317000(-)	m6A	CDS	24981863//22608085
chrX:169320058-169320059(-)	m6A	5'UTR//intron	25412662
chrX:169320102-169320103(-)	m6A	5'UTR//intron	25412662
chrX:169320125-169320126(-)	m6A	5'UTR//intron	25412662//25569111
chrX:169320223-169320224(-)	m6A	5'UTR	25412662//24981863//25569111
chrX:169320239-169320240(-)	m6A	5'UTR	25412662//24981863//25569111
chrX:169320304-169320305(-)	m6A	5'UTR	25412662//24981863//25569111

RNA Localization:

Resource

Symbol

Subcellular Localization

Tissue or Cell Line

PMID

RNALocate

Hccs

Nucleus

Neuroblastoma cell line (N2A)

22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m107-1-5p

Interactor2: Hccs

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar