Detail Information

Basic Information:


  VIRBase ID:  

VHID00618265

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m107-1-5p:           Acp1:      

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Interactor Information:


Interactor1 Interactor2
Symbol mcmv-miR-m107-1-5p Acp1
miRBase
Accession/Entrez ID
MIMAT0005555 11431
Organism Murid betaherpesvirus 1 Mus musculus
Category miRNA mRNA
Alias - 4632432E04Rik//Acp//Acp-1//AI427468//Lm//Lmptp//LMW-//LMW-PTP

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Acp1
chr12:30895596-30895597(-) m6A 3'UTR       24981863
chr12:30895602-30895603(-) m6A 3'UTR       24981863
chr12:30895612-30895613(-) m6A 3'UTR       24981863
chr12:30895627-30895628(-) m6A 3'UTR       24981863
chr12:30895635-30895636(-) m6A 3'UTR       24981863
chr12:30895661-30895662(-) m6A 3'UTR       24981863
chr12:30895670-30895671(-) m6A 3'UTR       24981863
chr12:30895700-30895701(-) m6A 3'UTR       24981863
chr12:30904972-30904973(-) m6A CDS//intron       25569111
chr12:30905098-30905099(-) m6A CDS       25569111
chr12:30911533-30911534(-) m6A 5'UTR       25569111

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate Acp1
Exosome Mast cells     17486113

Interaction Network (The top 100 interactions):


Interactor1: mcmv-miR-m107-1-5p
Interactor2: Acp1

Evidence Support:


Prediction-Evidence Rep
Support Database RepTar

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