Basic Information:

  VIRBase ID:  

VHID00617767

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m88-1-3p:  MIMAT0005552          Rap1gap2:  NM_001015046     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m88-1-3p	Rap1gap2
miRBase Accession/Entrez ID	MIMAT0005552	380711
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	AU067654//Ga//Garnl4//Gm1561//mKIAA1039

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Rap1gap2	chr11:74383729-74383730(-) m6A 3'UTR//exon       24981863//22608085 chr11:74384637-74384638(-) m6A 3'UTR//exon       24981863 chr11:74384651-74384652(-) m6A 3'UTR//exon       24981863 chr11:74384721-74384722(-) m6A 3'UTR//exon       24981863//22608085 chr11:74387096-74387097(-) m6A 3'UTR//exon       25412662//24981863 chr11:74387187-74387188(-) m6A 3'UTR//exon       25683224//25412662//24981863//22608085 chr11:74387241-74387242(-) m6A 3'UTR//exon       25683224//24981863 chr11:74393414-74393415(-) m6A CDS//exon       25412662//22608085 chr11:74393442-74393443(-) m6A CDS//exon       25412662//22608085 chr11:74393456-74393457(-) m6A CDS//exon       25412662//22608085 chr11:74395785-74395786(-) m6A CDS//exon       25412662//22608085 chr11:74395793-74395794(-) m6A CDS//exon       25412662//22608085 chr11:74395834-74395835(-) m6A CDS//exon       25412662//22608085 chr11:74395868-74395869(-) m6A CDS//exon       25412662//22608085 chr11:74397367-74397368(-) m6A CDS//exon       25412662//22608085 chr11:74397423-74397424(-) m6A CDS//exon       25412662//22608085 chr11:74405815-74405816(-) m6A CDS//exon       25412662//22608085 chr11:74405831-74405832(-) m6A CDS//exon       25412662//22608085 chr11:74405850-74405851(-) m6A CDS//exon       25412662//22608085 chr11:74407329-74407330(-) m6A CDS//exon       25412662//22608085 chr11:74437005-74437006(-) m6A CDS       25412662//22608085 chr11:74437068-74437069(-) m6A CDS       25412662//22608085 chr11:74438267-74438268(-) m6A CDS//intron       25412662//22608085 chr11:74438278-74438279(-) m6A CDS//intron       25412662//22608085 chr11:74522416-74522417(-) m6A CDS//intron       25412662//22608085 chr11:74522437-74522438(-) m6A CDS//intron       25412662//22608085 chr11:74522718-74522719(-) m6A 5'UTR//intron       25412662//24981863//22608085 chr11:74567240-74567241(-) m6A 5'UTR//CDS       24981863//22608085 chr11:74589999-74590000(-) m6A 5'UTR//intron       24981863//22608085

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m88-1-3p
Interactor2: Rap1gap2

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar