Basic Information:

  VIRBase ID:  

VHID00617757

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m88-1-3p:  MIMAT0005552          Agap1:  NM_001037136     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m88-1-3p	Agap1
miRBase Accession/Entrez ID	MIMAT0005552	347722
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	Centg//Centg2//Gga//Ggap1//mKIAA1099//R75364

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Agap1	chr1:89454956-89454957(+) m6A 5'UTR       25412662//25569111 chr1:89455196-89455197(+) m6A 5'UTR       25683224//25412662//24981863//25569111 chr1:89455559-89455560(+) m6A CDS//exon       25683224 chr1:89459663-89459664(+) m6A exon//intron       24981863 chr1:89580252-89580253(+) m6A 5'UTR//intron       25412662//24981863 chr1:89580393-89580394(+) m6A 5'UTR//intron       25412662//24981863 chr1:89580518-89580519(+) m6A 5'UTR//intron       25412662//24981863//25569111 chr1:89580556-89580557(+) m6A 5'UTR//intron       25683224//25412662//24981863//25569111 chr1:89580744-89580745(+) m6A 5'UTR//intron       25683224//25412662//24981863//25569111 chr1:89580759-89580760(+) m6A 5'UTR//intron       25683224//25412662//24981863//25569111 chr1:89580772-89580773(+) m6A 5'UTR//intron       25683224//25412662//24981863//25569111 chr1:89580824-89580825(+) m6A 5'UTR//intron       25683224//25412662//24981863//25569111 chr1:89580996-89580997(+) m6A 5'UTR//intron       25683224//25412662//24981863//25569111 chr1:89581080-89581081(+) m6A 5'UTR//intron       25412662//24981863//25569111 chr1:89581377-89581378(+) m6A 5'UTR//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr1:89581410-89581411(+) m6A 5'UTR//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr1:89581422-89581423(+) m6A 5'UTR//intron       25683224//25456834//25412662//24981863//25569111 chr1:89604609-89604610(+) m6A 5'UTR//CDS       25683224//25412662//22608085 chr1:89604623-89604624(+) m6A 5'UTR//CDS       25683224//25412662//22608085 chr1:89627794-89627795(+) m6A 5'UTR//CDS       25683224//22608085 chr1:89630450-89630451(+) m6A CDS       25683224//22608085 chr1:89630490-89630491(+) m6A CDS       25683224//22608085 chr1:89630522-89630523(+) m6A CDS       25683224//22608085 chr1:89671200-89671201(+) m6A CDS       25683224//25412662//24981863//22608085 chr1:89671233-89671234(+) m6A CDS       25683224//25412662//24981863//22608085 chr1:89671267-89671268(+) m6A CDS       25683224//24981863//22608085 chr1:89725994-89725995(+) m6A CDS       25683224//24981863//22608085 chr1:89743761-89743762(+) m6A CDS       25683224//22608085 chr1:89743772-89743773(+) m6A CDS       25683224//22608085 chr1:89743844-89743845(+) m6A CDS       25683224//22608085 chr1:89743863-89743864(+) m6A CDS       25683224//22608085 chr1:89766446-89766447(+) m6A CDS//intron       24981863 chr1:89823875-89823876(+) m6A CDS//intron       25683224//22608085 chr1:89823880-89823881(+) m6A CDS//intron       25683224//22608085 chr1:89834445-89834446(+) m6A CDS       25683224//24981863//22608085 chr1:89837772-89837773(+) m6A CDS       25683224//24981863//22608085 chr1:89837787-89837788(+) m6A CDS       25683224//24981863//22608085 chr1:89843041-89843042(+) m6A CDS       25683224//22608085 chr1:89843122-89843123(+) m6A CDS       25683224//25412662//22608085 chr1:89843217-89843218(+) m6A CDS       25683224//25412662//24981863//25569111 chr1:89843233-89843234(+) m6A CDS       25683224//25412662//24981863//25569111 chr1:89887547-89887548(+) m6A CDS       25683224//25412662//24981863//25569111 chr1:89887621-89887622(+) m6A CDS       25683224//25412662//24981863//25569111 chr1:89887629-89887630(+) m6A CDS       25683224//25412662//24981863//25569111 chr1:89887677-89887678(+) m6A CDS       25683224//25412662//24981863//25569111 chr1:89888727-89888728(+) m6A CDS       25683224//24981863//25569111 chr1:89888859-89888860(+) m6A CDS       25683224//25412662//24981863//25569111 chr1:89889037-89889038(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr1:89889043-89889044(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr1:89889087-89889088(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr1:89889122-89889123(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr1:89889165-89889166(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr1:89889571-89889572(+) Y 3'UTR//exon       26075521 chr1:89889719-89889720(+) m6A 3'UTR       24981863 chr1:89889796-89889797(+) m6A 3'UTR       24981863 chr1:89889819-89889820(+) m6A 3'UTR       24981863//25456834 chr1:89889835-89889836(+) m6A 3'UTR       25683224//24981863//25456834 chr1:89889996-89889997(+) m6A 3'UTR       25683224//24981863 chr1:89890111-89890112(+) m6A 3'UTR       25683224//24981863//26404942 chr1:89890132-89890133(+) m6A 3'UTR       25683224//24981863//25569111//26404942 chr1:89890195-89890196(+) m6A 3'UTR       25683224//25412662//24981863//25569111 chr1:89890259-89890260(+) m6A 3'UTR       25683224//25412662//24981863//25569111 chr1:89890276-89890277(+) m6A 3'UTR       25683224//25412662//24981863//25569111 chr1:89890313-89890314(+) m6A 3'UTR       25683224//25412662//24981863//25569111 chr1:89890320-89890321(+) m6A 3'UTR       25683224//25412662//24981863//25569111 chr1:89890385-89890386(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr1:89890460-89890461(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr1:89890482-89890483(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr1:89890488-89890489(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr1:89890495-89890496(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr1:89890599-89890600(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr1:89890639-89890640(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085 chr1:89890663-89890664(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085 chr1:89890716-89890717(+) m6A 3'UTR       25683224//25456834//24981863//25412662//25569111//26404942//22608085 chr1:89890723-89890724(+) m6A 3'UTR       25683224//25456834//24981863//25412662//25569111//26404942//22608085 chr1:89890819-89890820(+) m6A 3'UTR       25683224//25456834//24981863//25412662//25569111//22608085 chr1:89890876-89890877(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr1:89890956-89890957(+) m6A 3'UTR       25683224//25456834//24981863//25569111 chr1:89891041-89891042(+) m6A 3'UTR       24981863 chr1:89891054-89891055(+) m6A 3'UTR       24981863 chr1:89891601-89891602(+) m6A 3'UTR       25683224//22608085 chr1:89893374-89893375(+) m6A 3'UTR       25683224//22608085 chr1:89893392-89893393(+) m6A 3'UTR       25683224//22608085 chr1:89893408-89893409(+) m6A 3'UTR       25683224//22608085 chr1:89893459-89893460(+) m6A 3'UTR       25683224//22608085 chr1:89893883-89893884(+) m6A 3'UTR       25683224//25412662 chr1:89893919-89893920(+) m6A 3'UTR       25683224//25412662 chr1:89894223-89894224(+) m6A 3'UTR       24981863//22608085 chr1:89894246-89894247(+) m6A 3'UTR       24981863//22608085 chr1:89894259-89894260(+) m6A 3'UTR       24981863//22608085 chr1:89894334-89894335(+) m6A 3'UTR       24981863//22608085 chr1:89894677-89894678(+) m6A 3'UTR       25683224//24981863 chr1:89894705-89894706(+) m6A 3'UTR       25683224//24981863 chr1:89894773-89894774(+) m6A 3'UTR       25683224//22608085 chr1:89896311-89896312(+) m6A 3'UTR       25569111

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m88-1-3p
Interactor2: Agap1

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar