Basic Information:

  VIRBase ID:  

VHID00617700

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m88-1-3p:  MIMAT0005552          Fndc9:  NM_177075     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m88-1-3p	Fndc9
miRBase Accession/Entrez ID	MIMAT0005552	320116
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	C030019I05Rik

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Fndc9	chr11:46237731-46237732(+) m6A CDS       24981863 chr11:46237764-46237765(+) m6A CDS       25456834//24981863 chr11:46237823-46237824(+) m6A CDS       25683224//25456834//24981863//25569111 chr11:46237846-46237847(+) m6A CDS       25683224//25456834//24981863//25569111 chr11:46237977-46237978(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr11:46238147-46238148(+) m6A CDS       24981863 chr11:46238175-46238176(+) m6A CDS       24981863 chr11:46238200-46238201(+) m6A CDS       24981863 chr11:46238214-46238215(+) m6A CDS       24981863 chr11:46238239-46238240(+) m6A CDS       24981863 chr11:46238417-46238418(+) m6A 3'UTR       25456834//24981863//25569111 chr11:46238486-46238487(+) m6A 3'UTR       25456834//24981863//25569111 chr11:46238495-46238496(+) m6A 3'UTR       25456834//24981863//25569111 chr11:46238519-46238520(+) m6A 3'UTR       25456834//24981863//25569111 chr11:46238571-46238572(+) m6A 3'UTR       24981863//22608085 chr11:46238612-46238613(+) m6A 3'UTR       24981863 chr11:46238629-46238630(+) m6A 3'UTR       24981863 chr11:46238663-46238664(+) m6A 3'UTR       24981863 chr11:46238722-46238723(+) m6A 3'UTR       24981863 chr11:46238735-46238736(+) m6A 3'UTR       24981863 chr11:46238886-46238887(+) m6A 3'UTR       24981863 chr11:46238899-46238900(+) m6A 3'UTR       24981863 chr11:46238904-46238905(+) m6A 3'UTR       24981863 chr11:46238915-46238916(+) m6A 3'UTR       24981863 chr11:46238940-46238941(+) m6A 3'UTR       24981863 chr11:46238955-46238956(+) m6A 3'UTR       24981863 chr11:46239406-46239407(+) m6A 3'UTR       24981863//22608085 chr11:46239419-46239420(+) m6A 3'UTR       24981863//22608085 chr11:46239486-46239487(+) m6A 3'UTR       24981863//22608085 chr11:46239504-46239505(+) m6A 3'UTR       24981863//22608085 chr11:46239552-46239553(+) m6A 3'UTR       24981863 chr11:46239580-46239581(+) m6A 3'UTR       24981863 chr11:46239605-46239606(+) m6A 3'UTR       24981863 chr11:46239715-46239716(+) m6A 3'UTR       22608085 chr11:46239734-46239735(+) m6A 3'UTR       22608085

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m88-1-3p
Interactor2: Fndc9

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar