Basic Information:

  VIRBase ID:  

VHID00617697

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m88-1-3p:  MIMAT0005552          Nceh1:  NM_178772     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m88-1-3p	Nceh1
miRBase Accession/Entrez ID	MIMAT0005552	320024
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	Aad//Aadacl1//B230106I24Rik//CPO//CPO-BP//Nceh

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Nceh1	chr3:27182976-27182977(+) m6A 5'UTR       24981863//25569111 chr3:27182985-27182986(+) m6A 5'UTR       24981863//25569111 chr3:27183007-27183008(+) m6A 5'UTR//exon       25412662//24981863//25569111 chr3:27183058-27183059(+) m6A 5'UTR//exon       25683224//25412662//24981863//25569111 chr3:27183074-27183075(+) m6A 5'UTR//exon       25683224//25412662//24981863//25569111 chr3:27183172-27183173(+) m6A CDS//exon       24981863//25569111 chr3:27188447-27188448(+) m6A exon//intron       25569111 chr3:27222861-27222862(+) Y CDS//exon       26075521 chr3:27239620-27239621(+) m6A CDS//intron       24981863//25569111//22608085 chr3:27239662-27239663(+) m6A CDS//intron       25683224//24981863//25569111//22608085 chr3:27239696-27239697(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr3:27241235-27241236(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr3:27241273-27241274(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr3:27241306-27241307(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr3:27241351-27241352(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr3:27241396-27241397(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr3:27241455-27241456(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr3:27241486-27241487(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr3:27241506-27241507(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr3:27241608-27241609(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr3:27241702-27241703(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr3:27241776-27241777(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr3:27241810-27241811(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr3:27241826-27241827(+) m6A 3'UTR//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr3:27241873-27241874(+) m6A 3'UTR//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr3:27241878-27241879(+) m6A 3'UTR//intron       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr3:27241883-27241884(+) m6A 3'UTR//intron       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr3:27241888-27241889(+) m6A 3'UTR//intron       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr3:27241893-27241894(+) m6A 3'UTR//intron       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr3:27241900-27241901(+) m6A 3'UTR//intron       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr3:27241906-27241907(+) m6A 3'UTR//intron       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr3:27241975-27241976(+) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//22608085//22575960 chr3:27242020-27242021(+) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//22608085//22575960 chr3:27242028-27242029(+) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//22608085//22575960 chr3:27242195-27242196(+) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//22608085 chr3:27242275-27242276(+) m6A 3'UTR//intron       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr3:27242298-27242299(+) m6A 3'UTR//intron       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr3:27242365-27242366(+) m6A 3'UTR//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr3:27244293-27244294(+) m6A 3'UTR//intron       24981863 chr3:27244345-27244346(+) m6A 3'UTR//intron       24981863//25569111 chr3:27244430-27244431(+) m6A 3'UTR//intron       25683224//25456834//25412662//24981863//25569111//26404942//22608085 chr3:27244460-27244461(+) m6A 3'UTR//intron       25683224//25456834//25412662//24981863//25569111//26404942//22608085 chr3:27244508-27244509(+) m6A 3'UTR//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr3:27244623-27244624(+) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//22608085//22575960 chr3:27244680-27244681(+) m6A 3'UTR//intron       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr3:27244744-27244745(+) m6A 3'UTR//intron       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr3:27244752-27244753(+) m6A 3'UTR//intron       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr3:27244886-27244887(+) m6A 3'UTR//intron       24981863//22608085

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m88-1-3p
Interactor2: Nceh1

Evidence Support:

Prediction-Evidence	Rep
Support Database	RepTar