Basic Information:

  VIRBase ID:  

VHID00617695

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m88-1-3p:  MIMAT0005552          Ercc6:  NM_001081221     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m88-1-3p	Ercc6
miRBase Accession/Entrez ID	MIMAT0005552	319955
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	4732403I04//C130058G22Rik//CS//CSB

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Ercc6	chr14:32517002-32517003(+) m6A CDS       25683224//24981863//25569111 chr14:32517038-32517039(+) m6A CDS       25683224//24981863//25569111 chr14:32517273-32517274(+) m6A CDS       25683224//25569111 chr14:32517296-32517297(+) m6A CDS       25683224//25569111 chr14:32519016-32519017(+) m6A CDS       24981863//25569111 chr14:32519029-32519030(+) m6A CDS       24981863//25569111 chr14:32520949-32520950(+) m6A CDS       24981863//25569111 chr14:32520976-32520977(+) m6A CDS       24981863//25569111 chr14:32521024-32521025(+) m6A CDS       25683224 chr14:32526195-32526196(+) m6A CDS       25683224//25569111 chr14:32526260-32526261(+) m6A CDS       25683224//24981863//25569111 chr14:32526356-32526357(+) m6A CDS       25683224//25456834//24981863//25569111 chr14:32526375-32526376(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr14:32526426-32526427(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr14:32526436-32526437(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr14:32526462-32526463(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr14:32526494-32526495(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr14:32526551-32526552(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr14:32526589-32526590(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr14:32526644-32526645(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr14:32541233-32541234(+) m6A CDS       25683224//24981863//25456834 chr14:32541251-32541252(+) m6A CDS       25683224//24981863 chr14:32546754-32546755(+) m6A CDS       25683224//22608085 chr14:32546832-32546833(+) m6A CDS       25683224//22608085 chr14:32546883-32546884(+) m6A CDS       25683224//22608085 chr14:32552583-32552584(+) m6A CDS       25683224//22608085 chr14:32566253-32566254(+) m6A CDS       25683224 chr14:32566358-32566359(+) m6A CDS       25683224//22608085 chr14:32569639-32569640(+) m6A CDS       25569111 chr14:32569758-32569759(+) m6A CDS       25683224//24981863//25569111 chr14:32569785-32569786(+) m6A CDS       25683224//24981863//25569111 chr14:32569803-32569804(+) m6A CDS       25683224//24981863//25569111 chr14:32569874-32569875(+) m6A CDS       25683224//25412662//24981863//25569111 chr14:32569957-32569958(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr14:32569989-32569990(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr14:32570148-32570149(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr14:32570153-32570154(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr14:32570171-32570172(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr14:32570235-32570236(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr14:32570275-32570276(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr14:32570310-32570311(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr14:32570355-32570356(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr14:32570383-32570384(+) m6A CDS       25683224//25412662//24981863//25569111 chr14:32575776-32575777(+) m6A CDS       25683224//24981863//25569111 chr14:32575820-32575821(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr14:32576806-32576807(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr14:32576846-32576847(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr14:32576888-32576889(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr14:32576908-32576909(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr14:32576917-32576918(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr14:32577023-32577024(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr14:32577054-32577055(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr14:32577118-32577119(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m88-1-3p
Interactor2: Ercc6

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar