Detail Information

Basic Information:


  VIRBase ID:  

VHID00617670

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m88-1-3p:           Spib:      

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Interactor Information:


Interactor1 Interactor2
Symbol mcmv-miR-m88-1-3p Spib
miRBase
Accession/Entrez ID
MIMAT0005552 272382
Organism Murid betaherpesvirus 1 Mus musculus
Category miRNA mRNA
Alias - Sp//Spi-B

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Spib
chr7:44526184-44526185(-) m6A 3'UTR       25412662
chr7:44526208-44526209(-) m6A 3'UTR       24981863//25412662
chr7:44526270-44526271(-) m6A 3'UTR       25683224//24981863//25412662
chr7:44526308-44526309(-) m6A 3'UTR       25683224//24981863//25412662
chr7:44527646-44527647(-) m6A 3'UTR       22608085
chr7:44527721-44527722(-) m6A 3'UTR       22608085
chr7:44527943-44527944(-) m6A 3'UTR       24981863
chr7:44528009-44528010(-) m6A CDS       24981863//25412662
chr7:44528038-44528039(-) m6A CDS       24981863//25412662
chr7:44528199-44528200(-) m6A CDS       25412662
chr7:44528892-44528893(-) m6A CDS       25412662
chr7:44528916-44528917(-) m6A CDS       25412662
chr7:44528928-44528929(-) m6A CDS       25412662
chr7:44529391-44529392(-) m6A CDS       24981863//22608085
chr7:44529455-44529456(-) m6A CDS       24981863
chr7:44529512-44529513(-) m6A CDS       24981863

Interaction Network (The top 100 interactions):


Interactor1: mcmv-miR-m88-1-3p
Interactor2: Spib

Evidence Support:


Prediction-Evidence cRep//Rep
Support Database RepTar

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