Basic Information:

  VIRBase ID:  

VHID00617642

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m88-1-3p:  MIMAT0005552          Mgat4a:  NM_173870     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m88-1-3p	Mgat4a
miRBase Accession/Entrez ID	MIMAT0005552	269181
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	9530018I07Rik//glcNAc-T-IVa//GnT//GnT-IVa

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Mgat4a	chr1:37440076-37440077(-) m6A 3'UTR       24981863 chr1:37440129-37440130(-) m6A 3'UTR       24981863 chr1:37440139-37440140(-) m6A 3'UTR       24981863 chr1:37440193-37440194(-) m6A 3'UTR       24981863 chr1:37444286-37444287(-) m6A 3'UTR       24981863//25456834 chr1:37444310-37444311(-) m6A 3'UTR       24981863//25456834 chr1:37444349-37444350(-) m6A 3'UTR       24981863//25456834//25569111//22608085 chr1:37444416-37444417(-) m6A 3'UTR       25456834//24981863//25569111//22608085 chr1:37444465-37444466(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr1:37444519-37444520(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr1:37444525-37444526(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr1:37444578-37444579(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr1:37444584-37444585(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr1:37444646-37444647(-) m6A 3'UTR       25683224//25456834//24981863 chr1:37444834-37444835(-) m6A CDS       25456834 chr1:37487071-37487072(-) m6A intron       24981863 chr1:37487094-37487095(-) m6A intron       24981863 chr1:37487553-37487554(-) m6A intron       24981863//22608085 chr1:37487563-37487564(-) m6A intron       24981863//22608085 chr1:37487575-37487576(-) m6A intron       24981863//22608085 chr1:37487686-37487687(-) m6A intron       25683224//24981863//22608085 chr1:37487715-37487716(-) m6A intron       25683224//24981863//22608085 chr1:37487758-37487759(-) m6A intron       24981863//22608085 chr1:37487780-37487781(-) m6A intron       24981863//22608085 chr1:37487869-37487870(-) m6A intron       24981863//22608085 chr1:37487894-37487895(-) m6A intron       24981863//22608085 chr1:37487920-37487921(-) m6A intron       24981863//22608085 chr1:37487938-37487939(-) m6A intron       24981863//22608085 chr1:37487975-37487976(-) m6A intron       24981863 chr1:37488019-37488020(-) m6A intron       24981863 chr1:37488033-37488034(-) m6A intron       24981863 chr1:37488052-37488053(-) m6A intron       24981863 chr1:37488064-37488065(-) m6A intron       24981863 chr1:37488073-37488074(-) m6A intron       24981863 chr1:37488084-37488085(-) m6A intron       24981863 chr1:37488132-37488133(-) m6A intron       24981863 chr1:37488255-37488256(-) m6A intron       24981863//22608085 chr1:37488301-37488302(-) m6A intron       24981863//22608085 chr1:37488309-37488310(-) m6A intron       24981863//22608085 chr1:37488346-37488347(-) m6A intron       24981863//22608085 chr1:37488383-37488384(-) m6A intron       24981863//22608085 chr1:37488425-37488426(-) m6A intron       24981863 chr1:37488433-37488434(-) m6A intron       24981863 chr1:37488475-37488476(-) m6A intron       24981863 chr1:37488505-37488506(-) m6A intron       24981863 chr1:37535866-37535867(-) m6A exon//intron       24981863 chr1:37535880-37535881(-) m6A exon//intron       24981863 chr1:37535893-37535894(-) m6A exon//intron       24981863 chr1:37536226-37536227(-) m6A 5'UTR//exon       24981863 chr1:37536284-37536285(-) m6A 5'UTR       24981863 chr1:37536352-37536353(-) m6A 5'UTR       24981863//25569111 chr1:37536361-37536362(-) m6A 5'UTR       24981863//25569111

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m88-1-3p
Interactor2: Mgat4a

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar