Basic Information:

  VIRBase ID:  

VHID00617615

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m88-1-3p:  MIMAT0005552          Atxn7:  NM_139227     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m88-1-3p	Atxn7
miRBase Accession/Entrez ID	MIMAT0005552	246103
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	A430107N12Rik//AI627028//atax//ataxin-7//Sc//Sca7

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Atxn7	chr14:14012587-14012588(+) m6A 5'UTR       25412662 chr14:14012616-14012617(+) m6A 5'UTR       25412662//24981863 chr14:14013243-14013244(+) m6A CDS       25412662//25569111 chr14:14013319-14013320(+) m6A CDS       25683224//25412662 chr14:14013352-14013353(+) m6A CDS       25683224//22608085 chr14:14013588-14013589(+) m6A CDS       25683224//22608085 chr14:14013625-14013626(+) m6A CDS       25683224//22608085 chr14:14089354-14089355(+) m6A CDS       25683224//22608085 chr14:14089413-14089414(+) m6A CDS       25683224//22608085 chr14:14095855-14095856(+) m6A CDS       25683224 chr14:14095860-14095861(+) m6A CDS       25683224 chr14:14096254-14096255(+) m6A CDS       25683224//22608085 chr14:14099992-14099993(+) m6A CDS       24981863//25569111 chr14:14100158-14100159(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr14:14100183-14100184(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr14:14100261-14100262(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr14:14100276-14100277(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr14:14100377-14100378(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr14:14100449-14100450(+) m6A CDS       25683224//25456834//24981863//25569111//22608085//22575960 chr14:14100464-14100465(+) m6A CDS       25683224//25456834//24981863//25569111//22608085//22575960 chr14:14100484-14100485(+) m6A CDS       25683224//25456834//24981863//25569111//22608085//22575960 chr14:14100547-14100548(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr14:14100641-14100642(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr14:14100693-14100694(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr14:14100728-14100729(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr14:14100795-14100796(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr14:14100827-14100828(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr14:14100843-14100844(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr14:14100881-14100882(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr14:14103357-14103358(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr14:14103369-14103370(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr14:14103398-14103399(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr14:14103514-14103515(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22575960 chr14:14103565-14103566(+) m6A 3'UTR       25683224//25456834//24981863//25569111 chr14:14103948-14103949(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr14:14104084-14104085(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111 chr14:14104120-14104121(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111 chr14:14106368-14106369(+) Y 3'UTR//exon       26075521 chr14:14107089-14107090(+) m6A 3'UTR       25683224//24981863 chr14:14107117-14107118(+) m6A 3'UTR       25683224//24981863

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m88-1-3p
Interactor2: Atxn7

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar