Basic Information:

  VIRBase ID:  

VHID00617612

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m88-1-3p:  MIMAT0005552          Pcmtd2:  NM_001291211     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m88-1-3p	Pcmtd2
miRBase Accession/Entrez ID	MIMAT0005552	245867
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	5330414D10Rik//AI314201

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Pcmtd2	chr2:181837942-181837943(+) m6A 5'UTR       25683224//24981863//25569111//22608085//22575960 chr2:181837955-181837956(+) m6A 5'UTR       25683224//24981863//25569111//22608085//22575960 chr2:181840877-181840878(+) m6A 5'UTR//intron       25683224//24981863//25569111//22608085 chr2:181842396-181842397(+) m6A 5'UTR       25683224//24981863 chr2:181842426-181842427(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr2:181842477-181842478(+) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085 chr2:181842555-181842556(+) m6A CDS//exon       25683224//25456834//24981863//25569111 chr2:181842568-181842569(+) m6A CDS//exon       25683224//25456834//24981863//25569111 chr2:181851624-181851625(+) m6A CDS//exon       25412662//24981863//25569111 chr2:181851686-181851687(+) m6A CDS//exon       25412662//24981863//25569111 chr2:181851695-181851696(+) m6A CDS//exon       25412662//24981863//25569111 chr2:181854964-181854965(+) m6A CDS//exon       25456834//25412662//24981863//25569111 chr2:181855042-181855043(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr2:181855089-181855090(+) m6A 3'UTR//CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr2:181855105-181855106(+) m6A 3'UTR//CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr2:181855197-181855198(+) m6A 3'UTR//CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:181855209-181855210(+) m6A 3'UTR//CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:181855231-181855232(+) m6A 3'UTR//CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:181855327-181855328(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr2:181855346-181855347(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr2:181855401-181855402(+) m6A 3'UTR//exon       25456834//24981863//25412662//25569111//22608085 chr2:181855448-181855449(+) m6A 3'UTR//exon       25456834//24981863//25569111//22608085 chr2:181855516-181855517(+) m6A 3'UTR//exon       25456834//24981863//25569111//22608085 chr2:181855527-181855528(+) m6A 3'UTR//exon       25456834//24981863//25569111//22608085 chr2:181855572-181855573(+) m6A 3'UTR//exon       25456834//24981863//25569111//22608085 chr2:181855843-181855844(+) m6A 3'UTR       25412662//24981863 chr2:181855892-181855893(+) m6A 3'UTR       25412662//24981863 chr2:181856816-181856817(+) m6A 3'UTR       25456834//24981863 chr2:181856933-181856934(+) m6A 3'UTR       24981863//22608085 chr2:181856959-181856960(+) m6A 3'UTR       24981863//26404942//22608085 chr2:181856981-181856982(+) m6A 3'UTR       24981863//26404942 chr2:181857029-181857030(+) m6A 3'UTR       24981863//26404942

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m88-1-3p
Interactor2: Pcmtd2

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar