Basic Information:

  VIRBase ID:  

VHID00617596

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m88-1-3p:  MIMAT0005552          Ppp1r3b:  NM_177741     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m88-1-3p	Ppp1r3b
miRBase Accession/Entrez ID	MIMAT0005552	244416
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	6430576E21//AW821953//G//GL//PTG

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Ppp1r3b	chr8:35375828-35375829(+) m6A 5'UTR//intron       22575960 chr8:35376643-35376644(+) m6A 5'UTR//intron       24981863 chr8:35378105-35378106(+) m6A exon//intron       22575960 chr8:35378116-35378117(+) m6A exon//intron       22575960 chr8:35378191-35378192(+) m6A exon//intron       22575960 chr8:35378207-35378208(+) m6A exon//intron       22575960 chr8:35379473-35379474(+) m6A exon//intron       24981863 chr8:35379504-35379505(+) m6A exon//intron       24981863 chr8:35384018-35384019(+) m6A CDS       24981863 chr8:35384091-35384092(+) m6A CDS       24981863 chr8:35384176-35384177(+) m1A CDS       26863196 chr8:35384185-35384186(+) m1A CDS       26863196 chr8:35384294-35384295(+) m6A CDS       24981863//25569111 chr8:35384372-35384373(+) m6A CDS       24981863//25569111//26404942 chr8:35384392-35384393(+) m6A CDS       24981863//25569111//26404942 chr8:35384414-35384415(+) m6A CDS       25456834//24981863//25569111//26404942//22575960 chr8:35384462-35384463(+) m6A CDS       25456834//24981863//25569111//26404942//22575960 chr8:35384549-35384550(+) m6A CDS       25683224//25456834//24981863//25569111//26404942//22575960 chr8:35384567-35384568(+) m6A CDS       25683224//25456834//24981863//25569111//26404942//22608085//22575960 chr8:35384573-35384574(+) m6A CDS       25683224//25456834//24981863//25569111//26404942//22608085//22575960 chr8:35384672-35384673(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//26404942//22575960 chr8:35384690-35384691(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//26404942//22575960 chr8:35384712-35384713(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//26404942//22575960 chr8:35384751-35384752(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//26404942//22575960 chr8:35384934-35384935(+) m6A 3'UTR       25456834//25412662//24981863//25569111//22575960 chr8:35384962-35384963(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22575960 chr8:35384989-35384990(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22575960 chr8:35385136-35385137(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22575960 chr8:35385168-35385169(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960 chr8:35385188-35385189(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960 chr8:35385297-35385298(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22575960 chr8:35385410-35385411(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22575960 chr8:35385419-35385420(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22575960 chr8:35385568-35385569(+) m6A 3'UTR       25456834//24981863//25569111//26404942//22608085//22575960 chr8:35385578-35385579(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085//22575960 chr8:35385587-35385588(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085//22575960 chr8:35385659-35385660(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085//22575960 chr8:35385705-35385706(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085//22575960 chr8:35385791-35385792(+) m6A 3'UTR       25456834//24981863//25569111//26404942//22575960 chr8:35385816-35385817(+) m6A 3'UTR       25456834//24981863//25569111//26404942//22575960 chr8:35385857-35385858(+) m6A 3'UTR       25456834//24981863//25569111//26404942//22575960 chr8:35385867-35385868(+) m6A 3'UTR       25456834//24981863//25569111//26404942//22575960 chr8:35385923-35385924(+) m6A 3'UTR       25456834//24981863//26404942//22575960 chr8:35386737-35386738(+) m6A 3'UTR       26404942 chr8:35386814-35386815(+) m6A 3'UTR       26404942 chr8:35387184-35387185(+) m6A 3'UTR       26404942 chr8:35387217-35387218(+) m6A 3'UTR       26404942 chr8:35387543-35387544(+) m6A 3'UTR       26404942 chr8:35387657-35387658(+) m6A 3'UTR       26404942//22575960 chr8:35387726-35387727(+) m6A 3'UTR       25683224//26404942//22575960 chr8:35387832-35387833(+) m6A 3'UTR       25683224//26404942//22575960 chr8:35387880-35387881(+) m6A 3'UTR       26404942//22575960 chr8:35387935-35387936(+) m6A 3'UTR       26404942//22575960 chr8:35387954-35387955(+) m6A 3'UTR       26404942//22575960

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m88-1-3p
Interactor2: Ppp1r3b

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar