Basic Information:

  VIRBase ID:  

VHID00617423

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m88-1-3p:  MIMAT0005552          Fam76a:  NM_001163792     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m88-1-3p	Fam76a
miRBase Accession/Entrez ID	MIMAT0005552	230789
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	Fam76a	chr4:132462598(-) A-I      intronic chr4:132462760(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	Fam76a	chr4:132906683(-) A-I intron -    22524474 chr4:132906845(-) A-I intron -    22524474

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Fam76a	chr4:132899746-132899747(-) m6A 3'UTR       24981863 chr4:132899867-132899868(-) m6A 3'UTR       25412662//24981863//22608085 chr4:132899929-132899930(-) m6A 3'UTR       24981863 chr4:132899940-132899941(-) m6A 3'UTR       24981863 chr4:132899966-132899967(-) m6A 3'UTR       24981863 chr4:132901024-132901025(-) m6A 3'UTR       24981863 chr4:132901076-132901077(-) m6A 3'UTR       24981863 chr4:132902031-132902032(-) m6A CDS       25412662//22608085 chr4:132902045-132902046(-) m6A CDS       25412662//22608085 chr4:132902061-132902062(-) m6A CDS       25412662//22608085 chr4:132920745-132920746(-) m6A CDS       25569111//22608085 chr4:132922439-132922440(-) m6A 5'UTR       25456834//25412662//24981863//25569111 chr4:132922498-132922499(-) m6A 5'UTR       25456834//25412662//24981863//25569111

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m88-1-3p
Interactor2: Fam76a

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar