Basic Information:

  VIRBase ID:  

VHID00617311

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m88-1-3p:  MIMAT0005552          Trio:  NM_001081302     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m88-1-3p	Trio
miRBase Accession/Entrez ID	MIMAT0005552	223435
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	6720464I07Rik//AA408740//Solo

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Trio	chr15:27731347-27731348(-) m6A 3'UTR       25683224//26404942 chr15:27731381-27731382(-) m6A 3'UTR       25683224//26404942 chr15:27731417-27731418(-) m6A 3'UTR       25683224//26404942 chr15:27731696-27731697(-) m6A 3'UTR       25683224//25412662//25569111 chr15:27731748-27731749(-) m6A 3'UTR       25683224//25412662//24981863//25569111 chr15:27731852-27731853(-) m6A 3'UTR       25683224//25412662//24981863//25569111 chr15:27731949-27731950(-) m6A 3'UTR       25456834//25412662//24981863//25569111//22608085 chr15:27732055-27732056(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr15:27732075-27732076(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr15:27732083-27732084(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr15:27732102-27732103(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr15:27732120-27732121(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr15:27732178-27732179(-) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085 chr15:27732264-27732265(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr15:27732293-27732294(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr15:27732398-27732399(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr15:27732404-27732405(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr15:27732409-27732410(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr15:27732515-27732516(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr15:27732553-27732554(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr15:27732580-27732581(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr15:27732640-27732641(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr15:27732680-27732681(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr15:27732740-27732741(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr15:27732758-27732759(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr15:27732783-27732784(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr15:27732860-27732861(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr15:27732881-27732882(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr15:27732917-27732918(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr15:27732982-27732983(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr15:27733512-27733513(-) m6A CDS       25683224//25456834//24981863//25569111 chr15:27736488-27736489(-) m6A CDS       22608085 chr15:27743959-27743960(-) m6A CDS       25683224//24981863//22608085 chr15:27743970-27743971(-) m6A CDS       25683224//24981863//25412662//22608085 chr15:27744072-27744073(-) m6A CDS       25683224//25412662//22608085 chr15:27747981-27747982(-) m6A CDS       25412662//24981863//25569111//22608085 chr15:27747987-27747988(-) m6A CDS       25683224//25412662//24981863//25569111//22608085 chr15:27748038-27748039(-) m6A CDS       25683224//25412662//24981863//25569111//22608085 chr15:27748182-27748183(-) m6A CDS       25683224//25412662//24981863//25456834//25569111//22608085 chr15:27748205-27748206(-) m6A CDS       25683224//25412662//24981863//25456834//25569111//22608085 chr15:27748210-27748211(-) m6A CDS       25683224//25412662//24981863//25456834//25569111//22608085 chr15:27748236-27748237(-) m6A CDS       25683224//25412662//24981863//25569111//22608085 chr15:27748257-27748258(-) m6A CDS       25683224//25412662//24981863//25569111//22608085 chr15:27748334-27748335(-) m6A CDS       25683224//25412662//24981863//25569111 chr15:27748339-27748340(-) m6A CDS       25683224//25412662//24981863//25569111 chr15:27748362-27748363(-) m6A CDS       25683224//25412662//24981863//25569111 chr15:27748470-27748471(-) m6A CDS       25683224//25412662//24981863 chr15:27748523-27748524(-) m6A CDS       25683224//25412662//24981863 chr15:27748698-27748699(-) m6A CDS       25412662 chr15:27752757-27752758(-) m6A CDS       25683224//22608085 chr15:27754028-27754029(-) m6A CDS       25683224//22608085 chr15:27755176-27755177(-) m6A CDS       25683224//22608085 chr15:27764001-27764002(-) m6A CDS       25683224//22608085 chr15:27765737-27765738(-) m6A CDS       25683224//22608085 chr15:27765749-27765750(-) m6A CDS       25683224//22608085 chr15:27765759-27765760(-) m6A CDS       25683224//22608085 chr15:27767989-27767990(-) m6A CDS       25412662//22608085 chr15:27770327-27770328(-) m6A CDS       25412662//22608085 chr15:27770365-27770366(-) m6A CDS       25412662//22608085 chr15:27772925-27772926(-) m6A CDS       25683224//25412662//22608085 chr15:27773003-27773004(-) m1A CDS       26863196 chr15:27773891-27773892(-) m6A CDS       25683224//25412662//24981863//22608085 chr15:27773993-27773994(-) m1A CDS       26863196 chr15:27818082-27818083(-) m6A CDS       25412662//22608085 chr15:27818092-27818093(-) m6A CDS       25412662//22608085 chr15:27818145-27818146(-) m6A CDS       25683224//25412662//22608085 chr15:27818151-27818152(-) m6A CDS       25683224//25412662//22608085 chr15:27818930-27818931(-) m6A CDS       25683224//25412662//22608085 chr15:27819016-27819017(-) m6A CDS       25683224//25412662//22608085 chr15:27819025-27819026(-) m6A CDS       25412662//22608085 chr15:27846768-27846769(-) m6A CDS       25412662//25569111//22608085 chr15:27846809-27846810(-) m6A CDS       25412662//25569111//22608085 chr15:27846832-27846833(-) m6A CDS       25412662//25569111//22608085 chr15:27847298-27847299(-) m6A CDS       25683224//25412662//24981863//25569111//22608085 chr15:27847339-27847340(-) m6A CDS       25683224//25412662//24981863//25569111//22608085 chr15:27847393-27847394(-) m6A CDS       25683224//25412662//24981863//25569111//22608085 chr15:27847405-27847406(-) m6A CDS       25683224//25412662//24981863//25569111//22608085 chr15:27848959-27848960(-) m6A CDS       25412662//22608085 chr15:27856125-27856126(-) m6A CDS       25683224//22608085 chr15:27856157-27856158(-) m6A CDS       25683224//22608085 chr15:27856201-27856202(-) m6A CDS       25683224//22608085 chr15:27856227-27856228(-) m6A CDS       25683224//22608085 chr15:27871194-27871195(-) m6A CDS       25683224//22608085 chr15:27871214-27871215(-) m6A CDS       25683224//22608085 chr15:27881384-27881385(-) m6A CDS       25683224//22608085 chr15:27881409-27881410(-) m6A CDS       25683224//22608085 chr15:27881421-27881422(-) m6A CDS       25683224//22608085 chr15:27897867-27897868(-) m6A CDS       25683224//22608085 chr15:27897920-27897921(-) m6A CDS       25683224//22608085 chr15:27898005-27898006(-) m6A CDS       25683224//24981863//25412662//22608085 chr15:27901174-27901175(-) m6A CDS       25683224//25412662//24981863//22608085 chr15:27901206-27901207(-) m6A CDS       25683224//25412662//24981863//22608085 chr15:27901229-27901230(-) m6A CDS       25683224//25412662//24981863//25569111 chr15:27901249-27901250(-) m6A CDS       25683224//25412662//24981863//25569111 chr15:27902512-27902513(-) m6A CDS       25683224//25412662//24981863//25569111 chr15:27902540-27902541(-) m6A CDS       25683224//25412662//24981863//25569111//22608085 chr15:27902551-27902552(-) m6A CDS       25683224//25412662//24981863//25569111//22608085 chr15:27902603-27902604(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr15:27902633-27902634(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr15:27902642-27902643(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr15:27902663-27902664(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr15:27902723-27902724(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr15:27902729-27902730(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr15:27902786-27902787(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr15:27902804-27902805(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr15:27902842-27902843(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr15:27905177-27905178(-) m6A CDS       25569111//22608085 chr15:27905271-27905272(-) m6A CDS       25569111//22608085 chr15:27905292-27905293(-) m6A CDS       25569111//22608085 chr15:28025371-28025372(-) m6A CDS       25412662

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m88-1-3p
Interactor2: Trio

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar