Basic Information:

  VIRBase ID:  

VHID00617295

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m88-1-3p:  MIMAT0005552          Ptpdc1:  NM_207232     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m88-1-3p	Ptpdc1
miRBase Accession/Entrez ID	MIMAT0005552	218232
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	AI843923//AW456874//Naa-1//Ptpcd1

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Ptpdc1	chr13:48578851-48578852(-) m6A 3'UTR       25683224//25412662 chr13:48578865-48578866(-) m6A 3'UTR       25683224//25412662//25569111 chr13:48578925-48578926(-) m6A 3'UTR       25683224//25412662 chr13:48579368-48579369(-) Y 3'UTR//exon       26075521 chr13:48583217-48583218(-) m6A CDS       25683224//24981863//25569111 chr13:48583264-48583265(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr13:48585986-48585987(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr13:48586033-48586034(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr13:48586073-48586074(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr13:48586082-48586083(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr13:48586089-48586090(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr13:48586096-48586097(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr13:48586133-48586134(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr13:48586305-48586306(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr13:48586334-48586335(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr13:48586372-48586373(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr13:48586401-48586402(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr13:48586508-48586509(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr13:48586533-48586534(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr13:48586542-48586543(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr13:48586552-48586553(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr13:48586580-48586581(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr13:48586603-48586604(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr13:48586751-48586752(-) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr13:48586803-48586804(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr13:48586831-48586832(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr13:48586865-48586866(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr13:48586888-48586889(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr13:48587074-48587075(-) m6A CDS       24981863//25569111 chr13:48587082-48587083(-) m6A CDS       24981863//25569111 chr13:48625430-48625431(-) m6A 5'UTR       25683224//25412662//25569111 chr13:48625497-48625498(-) m6A 5'UTR       25412662//25569111

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m88-1-3p
Interactor2: Ptpdc1

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar