Basic Information:

  VIRBase ID:  

VHID00617275

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m88-1-3p:  MIMAT0005552          Ggnbp2:  NM_153144     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m88-1-3p	Ggnbp2
miRBase Accession/Entrez ID	MIMAT0005552	217039
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	AI451896//C75939//D330017P12Rik//DIF-//DIF-3//Zfp40//Zfp403

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Ggnbp2	chr11:84832942-84832943(-) m6A 3'UTR       24981863//25456834//22608085 chr11:84832978-84832979(-) m6A 3'UTR       24981863//25456834//25569111//22608085 chr11:84833114-84833115(-) m6A CDS       24981863 chr11:84834397-84834398(-) m6A CDS       25412662 chr11:84834527-84834528(-) m6A CDS       24981863 chr11:84834537-84834538(-) m6A CDS       24981863 chr11:84834574-84834575(-) m6A CDS       24981863 chr11:84836367-84836368(-) m6A CDS       24981863 chr11:84836482-84836483(-) m6A CDS//exon       24981863 chr11:84836602-84836603(-) m6A CDS//exon       - chr11:84837930-84837931(-) m6A 5'UTR//CDS//exon       24981863 chr11:84837968-84837969(-) m6A 5'UTR//CDS//exon       24981863 chr11:84837984-84837985(-) m6A 5'UTR//CDS       24981863 chr11:84840059-84840060(-) m6A CDS//intron       24981863 chr11:84840094-84840095(-) m6A CDS//intron       24981863 chr11:84840136-84840137(-) m6A CDS//intron       24981863 chr11:84860636-84860637(-) m6A CDS//exon//intron       22608085 chr11:84869151-84869152(-) m6A exon//intron       25683224 chr11:84869181-84869182(-) m6A exon//intron       25683224 chr11:84869207-84869208(-) m6A exon//intron       25683224 chr11:84869620-84869621(-) m6A exon//intron       25683224//25412662//24981863 chr11:84869723-84869724(-) m6A exon//intron       25683224//25412662//24981863 chr11:84870630-84870631(-) m6A 5'UTR//intron       25683224//25412662//24981863//25569111

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m88-1-3p
Interactor2: Ggnbp2

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar