Basic Information:

  VIRBase ID:  

VHID00617240

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m88-1-3p:  MIMAT0005552          She:  NM_172530     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m88-1-3p	She
miRBase Accession/Entrez ID	MIMAT0005552	214547
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	9430022A14

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	She	chr3:89831638-89831639(+) m6A CDS       25456834 chr3:89831690-89831691(+) m6A CDS       25456834//24981863//25569111 chr3:89831698-89831699(+) m6A CDS       25456834//24981863//25569111 chr3:89831738-89831739(+) m6A CDS       25456834//24981863//25569111 chr3:89831778-89831779(+) m6A CDS       25456834//24981863//25569111 chr3:89831789-89831790(+) m6A CDS       25456834//24981863//25569111 chr3:89831807-89831808(+) m6A CDS       25456834//24981863//25569111 chr3:89831855-89831856(+) m6A CDS       25569111 chr3:89854774-89854775(+) m6A 3'UTR       25456834//24981863//25569111//22575960 chr3:89854779-89854780(+) m6A 3'UTR       25456834//24981863//25569111//22575960 chr3:89854799-89854800(+) m6A 3'UTR       25456834//24981863//25569111//22575960 chr3:89854849-89854850(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr3:89855037-89855038(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr3:89855122-89855123(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr3:89855203-89855204(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr3:89855263-89855264(+) m6A 3'UTR       25456834//24981863//25569111//22608085 chr3:89855625-89855626(+) m6A 3'UTR       25456834 chr3:89855665-89855666(+) m6A 3'UTR       25456834//24981863 chr3:89855670-89855671(+) m6A 3'UTR       25456834//24981863 chr3:89855695-89855696(+) m6A 3'UTR       25456834//24981863//22608085 chr3:89855704-89855705(+) m6A 3'UTR       25456834//24981863//22608085 chr3:89855744-89855745(+) m6A 3'UTR       25456834//24981863//22608085 chr3:89855840-89855841(+) m6A 3'UTR       25456834//24981863//22608085 chr3:89855846-89855847(+) m6A 3'UTR       25456834//24981863//22608085 chr3:89855855-89855856(+) m6A 3'UTR       25456834//24981863//22608085 chr3:89855878-89855879(+) m6A 3'UTR       25456834 chr3:89855891-89855892(+) m6A 3'UTR       25456834 chr3:89855912-89855913(+) m6A 3'UTR       25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	She	Exosome Mast cells     17486113

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m88-1-3p
Interactor2: She

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar